Files
coyote/assets/agents/deep-research/scripts/verify_sources.py
T
Dark-Alex-17 0ce2654173 feat(TASK-023): deep-research hardening — fail-safe scripts, fault fallbacks, pipeline notes
R3 guards: parse_request (crash → ask_topic), bootstrap_research,
combine_findings (crash → fault-text findings; also lifts branch-local
PIPELINE-FAULT findings into pipeline_faults, deduped), reflexion_gate
(crash fails forward to synthesize), incorporate_feedback (crash still
loops with a generic feedback note), verify_sources (top-level guard +
pipeline_notes fold).

Fallbacks per the plan's naming pins: plan → plan_fault → end_fault
(fail-closed; gains state_updates plan_failure per the TASK-016 rule);
research_one_question → branch-local question_fault (map collects the
fault finding); vet_sources/critique → degrade-visibly markers that
continue to the stage each node's own next pointed to; synthesize →
synth_fault → end_fault. end_fault renders
'DEEP_RESEARCH FAILED — PIPELINE-FAULT: <fault text>'.

Accepted-path visibility: verify_sources folds pipeline_faults into
pipeline_notes ('' when fault-free), appended to end_accepted's output
and the approval question — happy-path output stays byte-identical.
initial_state seeds questions: [] so a dying plan inside the static
fan-out leaves the sibling knowledge_lookup lane mapping over zero
items while end_fault renders.

R5: 19 python3-guarded regression tests + GraphParser wiring test;
bundled warning baseline unchanged.
2026-09-14 10:50:33 -06:00

117 lines
3.7 KiB
Python

#!/usr/bin/env python3
"""Check that the sources cited in the research report are reachable.
Scans the final report for URLs and DOIs, probes each with a HEAD
request, and writes a `source_check` summary into state so the human
reviewer sees broken citations at the approval step.
Times out per request so a slow source cannot stall the graph.
Pipeline-notes fold: end-node templates render unconditionally, so the
conditional "## Pipeline notes" section of the accepted report is built
HERE — the last stop before the approval gate on every accepted path,
including reflexion and feedback re-loops. `pipeline_notes` is the
rendered section when `pipeline_faults` is non-empty and the empty
string otherwise, keeping the happy-path `{{report}}{{pipeline_notes}}`
output byte-identical to the pre-hardening `{{report}}`.
Fail-safe (R3): per-URL probes were already guarded; the top level now
is too. On a crash the summary says sources were NOT checked, a
PIPELINE-FAULT is recorded (best-effort preserving existing faults), and
pipeline_notes still renders — the approval gate remains the backstop.
"""
import json
import os
import re
import urllib.error
import urllib.request
DOI_RE = re.compile(r"\b(10\.\d{4,9}/[-._;()/:A-Z0-9]+)", re.IGNORECASE)
URL_RE = re.compile(r"https?://[^\s)\]\}\"'>]+")
def load_state():
path = os.environ.get("GRAPH_STATE_FILE")
if path:
with open(path) as f:
return json.load(f)
return json.loads(os.environ.get("GRAPH_STATE", "{}"))
def safe_faults():
try:
state = load_state()
return [f for f in (state.get("pipeline_faults") or []) if isinstance(f, str)]
except Exception: # noqa: BLE001 — best-effort preservation only
return []
def render_notes(faults):
entries = [f for f in (faults or []) if isinstance(f, str) and f.strip()]
if not entries:
return ""
return "\n\n## Pipeline notes\n\n" + "\n".join(f"- {e}" for e in entries)
def reachable(url, timeout=5.0):
req = urllib.request.Request(url, method="HEAD")
try:
with urllib.request.urlopen(req, timeout=timeout) as resp:
return 200 <= resp.status < 400
except urllib.error.HTTPError as e:
return 200 <= e.code < 400
except Exception:
return False
def main():
state = load_state()
report = state.get("report") or ""
urls = sorted({u.rstrip(".,;)") for u in URL_RE.findall(report)})
dois = sorted(set(DOI_RE.findall(report)))
results = []
for url in urls:
ok = reachable(url)
results.append(f" {'OK' if ok else 'UNREACHABLE'} {url}")
for doi in dois:
url = f"https://doi.org/{doi}"
if url in urls:
continue
ok = reachable(url)
results.append(f" {'OK' if ok else 'UNREACHABLE'} DOI {doi} ({url})")
if not results:
summary = "No web sources were cited in the report."
else:
summary = (
f"Source reachability ({len(results)} checked):\n"
+ "\n".join(results)
)
notes = render_notes(state.get("pipeline_faults"))
print(json.dumps({"source_check": summary, "pipeline_notes": notes}))
try:
main()
except Exception as e: # noqa: BLE001 — a crashed source check must degrade, not die
faults = safe_faults()
faults.append(
f"PIPELINE-FAULT: source verification crashed — {e}; cited sources "
"were not checked for reachability"
)
print(
json.dumps(
{
"source_check": (
"Source verification crashed (pipeline fault) — cited "
"sources were NOT checked for reachability."
),
"pipeline_notes": render_notes(faults),
"pipeline_faults": faults,
}
)
)