Commit Graph
268 Commits
Author SHA1 Message Date
Dark-Alex-17 ebba976a27 fmt: applied formatting 2026-08-12 12:07:38 -06:00
Dark-Alex-17 c84f9522e9 feat(rag): offer the storage driver when an agent initializes its RAG
Agent startup and graph rag nodes both run an interactive wizard when their
knowledge base has not been built, but neither offered the driver choice that
interactive named-RAG creation has, so both silently produced a yaml store.

A plain agent was the worse of the two: AgentConfig carries only documents, so
there was no way to get a duckdb RAG for one, interactively or declaratively. A
graph node could at least declare driver: in the workflow.

Agent startup now passes prompt_for_driver, and a rag node whose wizard runs is
asked too. The prompt is skipped when the node already declares a driver, and
sits inside the not-fully-specified branch after the non-interactive bail, so
declarative workflows and headless runs are unchanged. Temp RAGs still pass
false: they are deleted on the next run, so a persistent store would only leave
a sidecar behind.

The prompt moves to select_rag_driver rather than being duplicated.
2026-08-12 12:02:15 -06:00
Dark-Alex-17 6d0a5550fe style: Removed some redundant comments 2026-08-11 20:56:51 -06:00
Dark-Alex-17 7b1c0342b4 fix(rag): delete the DuckDB write-ahead log alongside the store
Deleting a RAG removed its .duckdb file but left the sibling .duckdb.wal
behind. DuckDB only removes that log on a clean close, so any RAG whose
process was killed left one on disk, and creating a new RAG under the same
name let it inherit a write-ahead log describing someone else's data.

The test helper already cleaned the log up after itself, which is why no
test noticed the production path did not.
2026-08-11 16:55:19 -06:00
Dark-Alex-17 860566bf50 feat: let workflow rag nodes select a RAG driver
`RagNode` gains an optional `driver`, forwarded into `RagInitConfig` so a
graph node can build its knowledge base on duckdb instead of yaml. Nodes
that name no driver forward `None`, which still resolves to yaml, so
existing workflows are unaffected.

An unknown driver is rejected up front rather than at construction time.
`Rag::create` dispatches unknown drivers to its yaml catch-all, so a typo
would otherwise embed every document and persist the bogus string, after
which every subsequent load fails validation and the agent cannot start.
The check asks `RagData::validate()` through a probe value instead of
restating the list of valid drivers, so the two cannot drift.
2026-08-11 13:46:59 -06:00
Dark-Alex-17 ecda258d3a style: Cleaned up some minor styling issues 2026-08-11 13:04:27 -06:00
Dark-Alex-17 3abc30d633 fix(rag): emit an sbx kit v2 mixin and declare RAG credentials to the proxy
The RAG attach sidecar was written against the sbx kit v1 spec and still emitted schemaVersion "1" with network.allowedDomains, network.serviceDomains, network.serviceAuth, credentials.sources.<n>.env and environment.proxyManaged. Every one of those keys was removed in kit v2. Coyote does not validate mixins, it copies them byte-for-byte into spec.yaml, so the invalid document surfaced only as an opaque sbx failure with no indication of which mixin caused it.

generate_rag_sbx_mixin now builds the document from the shared serializer structs instead of a format! string, which is how the envelope drifted unnoticed in the first place. render_mixin_yaml and the RAG sidecar both go through a new render_mixin_document, giving one definition of the envelope and one enforcement point for the rule that every inject domain must also appear in permissions.network.allow.

Fix an auth bug the port exposed: inject_rag_secrets bound the API key with sbx secret set, but nothing ever emitted a matching credentials entry, so the proxy held a value with no inject rule and never rewrote the auth header. An attached RAG credential silently did not work inside the sandbox. The sidecar now declares that credential; a RAG with no API key declares none while still receiving egress.

Fix the service id: the bind passed the raw file stem instead of routing it through secret_service_id, so a RAG named My_Docs produced an illegal id. The bind and the generated credentials service now share that derivation and cannot disagree.

Retire sbx_domain_forms in favour of allow_entry_for_url, now pub(crate). It emitted both a bare host and host:port because v1 serviceDomains needed a bare key; v2 has no such need, so the extra entry is simply wrong. It also defaulted a schemeless host to port 6333 while normalize_base_url resolves it to http and port 80, meaning the allow entry named a port the client never dialled.
2026-08-10 15:58:40 -06:00
Dark-Alex-17 7a732436aa feat(rag): add attach-only Qdrant provider, attach wizard and sandbox wiring
Adds QdrantProvider as a read-only driver for pre-existing remote Qdrant
collections, an interactive '.rag attach' wizard, and the sandbox credential
and domain-whitelisting wiring that lets an attached RAG work inside a sandbox.

Attach-only by design: rebuild_indexes bails for both the attached and the
unattached case rather than silently succeeding. Coyote never writes to Qdrant
in this change.

Vectors are never hydrated back from Qdrant. Cosine collections L2-normalize
stored vectors on write, so reading them back returns unit-length copies of the
originals; the YAML vector copy is authoritative and the serialization guard
stays scoped to the duckdb driver alone.

Collections keyed by string or UUID point IDs are rejected at attach time. The
read path parses point ids as u64 inside a filter_map, so such a collection
would otherwise yield zero results with no error.

The three response-shape parsers are pure functions over an already-parsed JSON
body, unit-tested against captured fixtures, with the async wrappers delegating
to them rather than duplicating the logic.

'.rag' now splits its first argument, so '.rag attach <name>' no longer tries to
load a RAG literally named 'attach <name>'.
2026-08-10 13:40:22 -06:00
Dark-Alex-17 98d3ba4a83 feat(rag): add DuckDB provider behind the RAG driver abstraction
Phase 3 of the RAG driver abstraction. Adds a `DuckDbProvider` that keeps
vectors and document content in a `.duckdb` sidecar next to the existing
YAML metadata, selected by the `driver: duckdb` field.

- `src/rag/providers/duckdb.rs` (new): vector search via the vss extension
  and keyword search via fts, an all-or-nothing hydration path (a partial
  read is an error, never a shorter map), and an anti-wipe guard that
  refuses the destructive `CREATE OR REPLACE TABLE` when `data.vectors` is
  empty while `data.files` is not and the store still holds rows.
- `src/rag/mod.rs`: `sync_documents` now refreshes `bm25`/`node_to_docs`
  BEFORE the fallible `provider.rebuild_indexes`. `self.data` is already
  mutated by that point, so propagating a provider error afterwards would
  leave the derived in-memory state describing the previous corpus while
  `data` describes the new one. Both rebuilds are pure functions of
  `self.data` and cannot fail, so running them first is always safe.
- `src/config/paths.rs`: sidecar path helpers.
- `src/rag/providers/mod.rs`, `src/config/agent.rs`: driver dispatch and
  RAG cache keying.

Also keeps `RequestContext::rag_key` in lockstep with `rag` at the two
sites that were still missing it, so that a cache insert and its matching
invalidate are structurally incapable of disagreeing:

- `use_agent` assigned `self.rag` from the agent but never set `rag_key`.
  This one was live. Agent RAGs are inserted under `RagKey::Agent(<name>)`,
  so with `rag_key == None` the invalidation guards in `rebuild_rag` and
  `edit_rag_docs` matched nothing and `.rebuild rag` left the stale cache
  entry in place. Worse, a preceding `.rag <name>` left a stale
  `Named(<name>)` key attached to the agent's RAG, pointing the
  invalidation at an unrelated RAG's cache entry. Now mirrors the insert
  key exactly, yielding `None` when the agent has no RAG.
- `exit_agent` cleared `self.rag` but left `rag_key` behind. Latent rather
  than live, since `rebuild_rag`/`edit_rag_docs` both bail on
  `rag.is_none()` before reaching the invalidate guards, but the guards
  that make it unobservable are not the kind of thing to depend on.

Covered by `use_agent_does_not_carry_stale_rag_key`, and by a new
assertion in `exit_agent_clears_all_agent_state`.
2026-08-10 12:51:56 -06:00
Dark-Alex-17 a968c3228d feat(rag): add driver/attached fields, validation floors and force-reingest
Phase 1 of the RAG driver abstraction (design doc sections 5.1-5.5a).

Data model:
- Add `driver: String` (serde default "yaml" via RagData::default_driver) and
  `attached: bool` as the first two fields of RagData, so driver metadata sits
  at the top of each RAG YAML. Old files without them load unchanged.
- Add `#[serde(default)]` to the non-Option fields so a minimal attached-RAG
  YAML deserializes, and add `skip_serializing_if` to `vectors` so an empty
  map renders no `vectors:` key.
- Add a hand-written `impl Default for RagData` delegating to `RagData::new()`.
  It is deliberately not derived: a derived impl yields `driver: ""`, which is
  not a valid driver string.

Validation (the price of the new serde defaults):
- Add `RagData::validate()`, called from `Rag::load()` after deserialization.
  It enforces the (driver, attached) matrix and, critically, numeric floors
  that the new defaults would otherwise mask: `top_k >= 1` unconditionally
  (a 0 makes every query return nothing, silently), and `chunk_size >= 1` plus
  `chunk_overlap < chunk_size` when not attached (a 0 chunk_size is a real
  divide-by-zero panic while sizing embedding batches).
- Reject `.set rag_top_k 0` at the setter, before the set/update fork. Without
  this, the new load-time floor turns one keystroke into an unloadable RAG:
  the setter saves immediately and no dot-command can reach the file again.

Rebuild actually re-embeds now:
- `.rebuild rag` and `--rebuild-rag` previously re-scanned paths and re-embedded
  nothing, because the content-hash skip fired regardless of the refresh flag.
  Extract that decision into a module-level `find_hash_skip()` free function and
  thread a `force_reingest` flag through `sync_documents()` and
  `refresh_document_paths()`, set true only from `rebuild_rag()`. `.edit rag-docs`
  stays incremental. Re-embedding costs time and API spend, so `rebuild_rag()`
  now prints a one-line file-count warning first (no prompt: the path is
  reachable from a non-interactive CLI flag).

Attached-RAG guards:
- Block `.rebuild rag` / `--rebuild-rag` and `.edit rag-docs` on attached RAGs,
  which Coyote did not index and whose source documents it does not own.
- Add `Rag::driver()`, `Rag::is_attached()` and `Rag::file_count()`, and surface
  driver/attached through `Rag::export()` so `.info rag` shows them.

Adds 12 unit tests (1299 -> 1311), including the two gate tests pinning that a
forced re-ingest does not hash-skip while an ordinary refresh still does.
2026-08-10 11:04:51 -06:00
Dark-Alex-17 efa570267d feat(mcp): send RFC 8707 resource indicator in OAuth flows
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2026-08-06 16:13:06 -06:00
Dark-Alex-17 9540345ec7 feat: Added loaded indicators to .list tools/mcp-servers/skills
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2026-08-05 13:11:24 -06:00
Dark-Alex-17 70b6d51b55 test: Implemented unit tests to prevent regression on agent reasoning effort inheritance
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2026-08-04 13:12:37 -06:00
Dark-Alex-17 9e5e8a60f2 fix: agents inherit global reasoning effort if unset 2026-08-04 13:09:13 -06:00
Dark-Alex-17 e6dc24beb5 feat: add a new .recover command for sessions to recover from errors
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2026-08-04 12:02:31 -06:00
Dark-Alex-17 d79ea55e09 fix: include graph-agent descriptions in .agent <TAB> completions
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2026-07-27 09:34:36 -06:00
Dark-Alex-17 63a768aa46 fix: fresh wizard openai-compatible support
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2026-07-24 18:29:24 -06:00
Dark-Alex-17 2c3f671efa fix: config existence check for --fresh sandboxes
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2026-07-24 18:09:06 -06:00
Dark-Alex-17 8b0a536f4e feat: Dynamically detect if a selected client in the sandbox first run wizard supports oauth
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2026-07-24 18:07:30 -06:00
Dark-Alex-17 5a1bb569b4 feat: Add support for the --fresh flag again with host environment configuration injection
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2026-07-24 18:00:41 -06:00
Dark-Alex-17 f510bb649b feat: Improved credentials management for docker sandboxes 2026-07-24 16:26:35 -06:00
Dark-Alex-17 a2c4f05c8c feat: renamed the user__ask to user__select and improved descriptions to improve model usage 2026-07-23 18:22:18 -06:00
Dark-Alex-17 63f73f22c3 style: applied formatting to new long run features
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2026-07-23 12:30:30 -06:00
Dark-Alex-17 54c5079cb7 feat: long-running session improvements
- Hang fix: 120s timeout on compression LLM call + raw_stream
  channel-close handling (None => break instead of spinning)
- Supervisor effective active count: stop counting finished
  JoinHandles as occupying capacity slots
- Universal tool result size cap: truncate_if_needed() on
  ToolResult, applied in eval_tool_calls() after escalation block;
  configurable via max_tool_result_chars in AppConfig/AgentConfig
- Windowed compression: compression_keep_last config param keeps
  the N most recent messages visible after compression
- Fix pre-existing flaky test: add #[serial] to
  handle_list_available_unrestricted_when_no_whitelist so it does
  not race with TestConfigDirGuard-based tests that temporarily
  populate the agents data dir
2026-07-23 12:25:54 -06:00
Dark-Alex-17 df948c69bf feat: new spawnable_agents field in agents to let users restrict what agents can be spawned by a parent agent
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2026-07-22 14:29:55 -06:00
Dark-Alex-17 c60d3e7cda style: updated some stylistic things across the new markdown rendering implementation
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2026-07-22 13:20:56 -06:00
Dark-Alex-17 c21fd47b42 feat: replay pre-compressed messages as well when resuming sessions for users to see 2026-07-22 13:05:06 -06:00
Dark-Alex-17 ab0b89dd67 fix: fetch descriptions from graph agent configs as well when listing agents 2026-07-22 12:59:30 -06:00
Dark-Alex-17 420db4bb88 feat: created a new builtin function for agents who can spawn other agents to list available agents via agent__list_available 2026-07-22 12:50:41 -06:00
Dark-Alex-17 bf06d5e8f3 feat(render): wire table state machine and finalize hook 2026-07-22 12:23:44 -06:00
Dark-Alex-17 ed7ad36475 feat: Created the raw_markdown configuration flag 2026-07-22 11:03:27 -06:00
Dark-Alex-17 9606d7f8aa feat: added a .fork command to fork a new session from a running conversation
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2026-07-21 14:54:55 -06:00
Dark-Alex-17 6f2594712f refactor: Standardized paths module function names to not use 'path' in the name and to just always be either 'dir' or 'file'
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2026-07-21 10:15:42 -06:00
Dark-Alex-17 107419966d style: Cleaned up some comments and imports 2026-07-20 13:46:41 -06:00
Dark-Alex-17 ab85a4f534 feat: validate unique client names at config load 2026-07-20 13:07:41 -06:00
Dark-Alex-17 ad6d0a2e0e fix: resolve reasoning effort for the prompt for global defaults as well
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2026-07-17 17:52:38 -06:00
Dark-Alex-17 50911b99ef fix: Account for default model reasoning_effort when supplying that value for the REPL prompts
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2026-07-17 17:42:10 -06:00
Dark-Alex-17 44783c5573 feat: Added reasoning effort to the right prompt
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2026-07-17 17:34:10 -06:00
Dark-Alex-17 c979041161 fix: reduce code duplication by reusing the new concrete_tool_names function in .list tools
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2026-07-17 15:51:01 -06:00
Dark-Alex-17 a606ea552d fix: Agent tools can only be modified via .tool enable/disable using tools in the allowed whitelist in the agent 2026-07-17 15:42:57 -06:00
Dark-Alex-17 17d1decce6 feat: Also support GEMINI.md workspace instructions 2026-07-17 15:05:16 -06:00
Dark-Alex-17 a45e66c634 feat: Improved workspace instructions support 2026-07-17 14:52:35 -06:00
Dark-Alex-17 8c885d9a77 feat: also detect .mcp.json configurations at workspace roots 2026-07-17 14:03:08 -06:00
Dark-Alex-17 f5085a773a fix: hot-attach to MCP servers that require auth after running .mcp auth <name> 2026-07-17 13:16:25 -06:00
Dark-Alex-17 09afdeaf7c feat: Created new .tool enable/disable and .mcp enable/disable aliases to make REPL usage more egonomic 2026-07-17 12:53:59 -06:00
Dark-Alex-17 0216d84eee feat: Created a new .list <kind> REPL command to make discoveribility easier in the REPL 2026-07-17 11:49:49 -06:00
Dark-Alex-17 6958e9cba8 feat: Support claude-style hidden workspace MCP configuration files via .mcp.json
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2026-07-17 10:46:26 -06:00
Dark-Alex-17 825f9f6bf5 feat: Allow users to customize the workspace-specific configuration directory name so they can use Coyote with other CLI clients like .claude 2026-07-17 10:38:35 -06:00
Dark-Alex-17 9b3ae761f3 feat: Add reasoning_effort validation for the main configuration file
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2026-07-16 13:18:28 -06:00
Dark-Alex-17 0f7877aafc feat: Add validation for reasoning_effort settings to prevent users from specifying erroneous values 2026-07-16 13:12:11 -06:00