Commit Graph
26 Commits
Author SHA1 Message Date
Dark-Alex-17 7f90710427 refactor(rag): interpolate every driver_config value, not just api_key
Only `driver_config["api_key"]` was interpolated, so any credential-bearing
driver field added later would have shipped its raw `{{PLACEHOLDER}}` to the
server. Resolve every value instead, via `resolve_driver_config`.

Resolution still happens into a function-local copy and never touches
`RagData`: `save()` serializes `self.data` and is called by `.set rag_top_k`
and friends, so a resolved credential parked there would be written to the
RAG's YAML in plaintext. The literal `{{NAME}}` also has to survive on disk
because sandbox credential provisioning parses it back out to learn which
vault secret to bind. Scope stays `driver_config` deliberately: the rest of
a RAG file is ingested document text, where `{{...}}` is ordinary content.

Covered by a test that saves after a load and asserts the placeholder, not
the secret, is what reaches the file.
2026-08-11 13:46:32 -06:00
Dark-Alex-17 93a934439b fix(rag): fail loudly when a RAG's vault secret is missing
`interpolate_secrets` does not error on a secret the vault cannot resolve:
it substitutes the empty string and returns the name in its second tuple
element. `load_async` discarded that vec, so a typo'd or deleted vault
secret produced `api_key = ""` and an unexplained 401 from Qdrant.

Bail instead, naming the RAG and the missing secrets, matching what global
config loading already does.
2026-08-11 13:44:00 -06:00
Dark-Alex-17 ecda258d3a style: Cleaned up some minor styling issues 2026-08-11 13:04:27 -06:00
Dark-Alex-17 3abc30d633 fix(rag): emit an sbx kit v2 mixin and declare RAG credentials to the proxy
The RAG attach sidecar was written against the sbx kit v1 spec and still emitted schemaVersion "1" with network.allowedDomains, network.serviceDomains, network.serviceAuth, credentials.sources.<n>.env and environment.proxyManaged. Every one of those keys was removed in kit v2. Coyote does not validate mixins, it copies them byte-for-byte into spec.yaml, so the invalid document surfaced only as an opaque sbx failure with no indication of which mixin caused it.

generate_rag_sbx_mixin now builds the document from the shared serializer structs instead of a format! string, which is how the envelope drifted unnoticed in the first place. render_mixin_yaml and the RAG sidecar both go through a new render_mixin_document, giving one definition of the envelope and one enforcement point for the rule that every inject domain must also appear in permissions.network.allow.

Fix an auth bug the port exposed: inject_rag_secrets bound the API key with sbx secret set, but nothing ever emitted a matching credentials entry, so the proxy held a value with no inject rule and never rewrote the auth header. An attached RAG credential silently did not work inside the sandbox. The sidecar now declares that credential; a RAG with no API key declares none while still receiving egress.

Fix the service id: the bind passed the raw file stem instead of routing it through secret_service_id, so a RAG named My_Docs produced an illegal id. The bind and the generated credentials service now share that derivation and cannot disagree.

Retire sbx_domain_forms in favour of allow_entry_for_url, now pub(crate). It emitted both a bare host and host:port because v1 serviceDomains needed a bare key; v2 has no such need, so the extra entry is simply wrong. It also defaulted a schemeless host to port 6333 while normalize_base_url resolves it to http and port 80, meaning the allow entry named a port the client never dialled.
2026-08-10 15:58:40 -06:00
Dark-Alex-17 7a732436aa feat(rag): add attach-only Qdrant provider, attach wizard and sandbox wiring
Adds QdrantProvider as a read-only driver for pre-existing remote Qdrant
collections, an interactive '.rag attach' wizard, and the sandbox credential
and domain-whitelisting wiring that lets an attached RAG work inside a sandbox.

Attach-only by design: rebuild_indexes bails for both the attached and the
unattached case rather than silently succeeding. Coyote never writes to Qdrant
in this change.

Vectors are never hydrated back from Qdrant. Cosine collections L2-normalize
stored vectors on write, so reading them back returns unit-length copies of the
originals; the YAML vector copy is authoritative and the serialization guard
stays scoped to the duckdb driver alone.

Collections keyed by string or UUID point IDs are rejected at attach time. The
read path parses point ids as u64 inside a filter_map, so such a collection
would otherwise yield zero results with no error.

The three response-shape parsers are pure functions over an already-parsed JSON
body, unit-tested against captured fixtures, with the async wrappers delegating
to them rather than duplicating the logic.

'.rag' now splits its first argument, so '.rag attach <name>' no longer tries to
load a RAG literally named 'attach <name>'.
2026-08-10 13:40:22 -06:00
Dark-Alex-17 98d3ba4a83 feat(rag): add DuckDB provider behind the RAG driver abstraction
Phase 3 of the RAG driver abstraction. Adds a `DuckDbProvider` that keeps
vectors and document content in a `.duckdb` sidecar next to the existing
YAML metadata, selected by the `driver: duckdb` field.

- `src/rag/providers/duckdb.rs` (new): vector search via the vss extension
  and keyword search via fts, an all-or-nothing hydration path (a partial
  read is an error, never a shorter map), and an anti-wipe guard that
  refuses the destructive `CREATE OR REPLACE TABLE` when `data.vectors` is
  empty while `data.files` is not and the store still holds rows.
- `src/rag/mod.rs`: `sync_documents` now refreshes `bm25`/`node_to_docs`
  BEFORE the fallible `provider.rebuild_indexes`. `self.data` is already
  mutated by that point, so propagating a provider error afterwards would
  leave the derived in-memory state describing the previous corpus while
  `data` describes the new one. Both rebuilds are pure functions of
  `self.data` and cannot fail, so running them first is always safe.
- `src/config/paths.rs`: sidecar path helpers.
- `src/rag/providers/mod.rs`, `src/config/agent.rs`: driver dispatch and
  RAG cache keying.

Also keeps `RequestContext::rag_key` in lockstep with `rag` at the two
sites that were still missing it, so that a cache insert and its matching
invalidate are structurally incapable of disagreeing:

- `use_agent` assigned `self.rag` from the agent but never set `rag_key`.
  This one was live. Agent RAGs are inserted under `RagKey::Agent(<name>)`,
  so with `rag_key == None` the invalidation guards in `rebuild_rag` and
  `edit_rag_docs` matched nothing and `.rebuild rag` left the stale cache
  entry in place. Worse, a preceding `.rag <name>` left a stale
  `Named(<name>)` key attached to the agent's RAG, pointing the
  invalidation at an unrelated RAG's cache entry. Now mirrors the insert
  key exactly, yielding `None` when the agent has no RAG.
- `exit_agent` cleared `self.rag` but left `rag_key` behind. Latent rather
  than live, since `rebuild_rag`/`edit_rag_docs` both bail on
  `rag.is_none()` before reaching the invalidate guards, but the guards
  that make it unobservable are not the kind of thing to depend on.

Covered by `use_agent_does_not_carry_stale_rag_key`, and by a new
assertion in `exit_agent_clears_all_agent_state`.
2026-08-10 12:51:56 -06:00
Dark-Alex-17 d734276927 build(rag): add duckdb dependency and pin comfy-table to 7.1.4
Adds the duckdb crate with the bundled feature ahead of any provider
code, so the dependency and build surface can be proven on every CI
target on its own.

duckdb constrains comfy-table to ~7.1, so comfy-table moves from 7.2.2
to 7.1.4 while keeping custom_styling. That feature swaps
measure_text_width for an ANSI-stripping implementation that
render_table's pre-styled cells depend on; dropping it still compiles
and still passes every other test, and only corrupts column widths. A
regression test now renders a styled table at a fixed wrap width and
asserts every line has an equal ANSI-stripped display width.

comfy-table 7.1.4 pins crossterm 0.28 while coyote pins 0.29, so both
now build side by side. comfy_table::Color, Attribute and Cell are
consequently crossterm 0.28 types and must not be used; table styling
stays ANSI-string based.

Caches the DuckDB extension directory in CI, keyed on the runner OS and
the DuckDB version, so vss and fts survive an upstream outage.

Also switches merge_vector_results to f32::total_cmp. The previous
partial_cmp().unwrap_or(Equal) comparator is not total under NaN, which
sort_by is permitted to answer with a panic in release builds.
2026-08-10 11:59:57 -06:00
Dark-Alex-17 5049143fcc refactor(rag): extract RagProvider trait and add YamlProvider
Introduce a narrow `RagProvider` trait covering vector search and content
retrieval, and make `Rag` delegate to a boxed provider instead of owning an
HNSW index directly. `YamlProvider` is the sole implementation for now.

The trait deliberately stays narrow: embeddings, chunking, BM25 keyword
search, graph RAG, entity extraction, RRF merging and persistence all remain
on `Rag`/`RagData`, so a new storage backend does not have to reimplement
Coyote's indexing logic.

Notable points:

- `fetch_content`'s ordering contract is part of the trait, not an accident.
  Implementations must return results in input-`ids` order; `hybrid_search`
  passes an RRF-ranked list straight to the prompt builder, so a provider
  returning storage order would silently discard the ranking.
- The content store is keyed on `data.files`, never `data.vectors`. Both the
  content map and BM25 now route through the new `RagData::iter_documents()`
  so the two key spaces match by construction. `RagData::add` zips document
  ids with embeddings and truncates silently, so ids in `files \ vectors` are
  genuinely reachable.
- A provider keyword-search failure degrades to an empty ranker with a
  warning rather than failing the whole query; it is one of three RRF inputs.
  It deliberately does not fall back to the local BM25, which would be a
  silent ranking-algorithm swap once a provider with native FTS exists.
- The rerank path builds its text and id vectors from a single `fetch_content`
  result in one pass, so the reranker's positional indices cannot desync.

This is not a bit-for-bit no-op. `vector_search` now dedups by best score and
sorts globally instead of concatenating per-chunk hit lists. Single-chunk
queries (the common case) are unaffected. Multi-chunk queries get corrected
rank assignment and no longer let a document that matched several query
chunks accumulate multiple RRF contributions. There is no overall cap on the
merged pool — truncation remains `reciprocal_rank_fusion`'s job.

`RagData::get()` is removed: its only two callers were the content lookups
replaced here, and an unused private-module method fails the build under
`--deny warnings`. Its three tests were rewritten against `iter_documents()`,
one of which now guards the files-vs-vectors keying directly.

Implements Phase 2 of the RAG driver abstraction design (§6).
2026-08-10 11:41:37 -06:00
Dark-Alex-17 a968c3228d feat(rag): add driver/attached fields, validation floors and force-reingest
Phase 1 of the RAG driver abstraction (design doc sections 5.1-5.5a).

Data model:
- Add `driver: String` (serde default "yaml" via RagData::default_driver) and
  `attached: bool` as the first two fields of RagData, so driver metadata sits
  at the top of each RAG YAML. Old files without them load unchanged.
- Add `#[serde(default)]` to the non-Option fields so a minimal attached-RAG
  YAML deserializes, and add `skip_serializing_if` to `vectors` so an empty
  map renders no `vectors:` key.
- Add a hand-written `impl Default for RagData` delegating to `RagData::new()`.
  It is deliberately not derived: a derived impl yields `driver: ""`, which is
  not a valid driver string.

Validation (the price of the new serde defaults):
- Add `RagData::validate()`, called from `Rag::load()` after deserialization.
  It enforces the (driver, attached) matrix and, critically, numeric floors
  that the new defaults would otherwise mask: `top_k >= 1` unconditionally
  (a 0 makes every query return nothing, silently), and `chunk_size >= 1` plus
  `chunk_overlap < chunk_size` when not attached (a 0 chunk_size is a real
  divide-by-zero panic while sizing embedding batches).
- Reject `.set rag_top_k 0` at the setter, before the set/update fork. Without
  this, the new load-time floor turns one keystroke into an unloadable RAG:
  the setter saves immediately and no dot-command can reach the file again.

Rebuild actually re-embeds now:
- `.rebuild rag` and `--rebuild-rag` previously re-scanned paths and re-embedded
  nothing, because the content-hash skip fired regardless of the refresh flag.
  Extract that decision into a module-level `find_hash_skip()` free function and
  thread a `force_reingest` flag through `sync_documents()` and
  `refresh_document_paths()`, set true only from `rebuild_rag()`. `.edit rag-docs`
  stays incremental. Re-embedding costs time and API spend, so `rebuild_rag()`
  now prints a one-line file-count warning first (no prompt: the path is
  reachable from a non-interactive CLI flag).

Attached-RAG guards:
- Block `.rebuild rag` / `--rebuild-rag` and `.edit rag-docs` on attached RAGs,
  which Coyote did not index and whose source documents it does not own.
- Add `Rag::driver()`, `Rag::is_attached()` and `Rag::file_count()`, and surface
  driver/attached through `Rag::export()` so `.info rag` shows them.

Adds 12 unit tests (1299 -> 1311), including the two gate tests pinning that a
forced re-ingest does not hash-skip while an ordinary refresh still does.
2026-08-10 11:04:51 -06:00
Dark-Alex-17 304088bf5c tests: Added tests for graph-based RAG
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2026-07-16 14:33:52 -06:00
Dark-Alex-17 4f0dae9b49 feat: fully functional graph-based RAG
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2026-07-13 16:50:07 -06:00
Dark-Alex-17 deb673ebc9 fmt: applied some formatting changes 2026-07-13 16:07:19 -06:00
Dark-Alex-17 7fc06ad9bc feat: Implemented graph-based RAG 2026-07-08 21:20:50 -06:00
Dark-Alex-17 33c6f2c4e3 fix: use rawPredict for non-streaming Claude requests
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2026-06-09 23:05:31 -06:00
Dark-Alex-17 597f823bdf fmt: cleaned up graph implementation 2026-05-21 11:27:29 -06:00
Dark-Alex-17 e292c414c5 feat: added additional support for all RAG-configuration fields in RAG nodes 2026-05-15 16:38:52 -06:00
Dark-Alex-17 8a2f18204f feat: initial support for RAG nodes in the graph execution system 2026-05-15 14:11:23 -06:00
Dark-Alex-17 c53e0546d4 test: added integration tests for inter-feature interactions like RAG + Agents, function calling/MCP servers, etc. 2026-05-01 14:06:41 -06:00
Dark-Alex-17 349b3748bd test: Added unit tests for the rag, completions and prompt, macros, vault, and functions/tool usage 2026-05-01 13:24:58 -06:00
Dark-Alex-17 0421c9b643 style: Addressed style issues 2026-04-28 08:08:23 -06:00
Dark-Alex-17 a145a42b2b refactor: fully complete state re-architecting 2026-04-19 19:21:24 -06:00
Dark-Alex-17 83de60f59c refactor: created a single install_builtins free function to remove from Config::init 2026-04-19 17:54:50 -06:00
Dark-Alex-17 d81508c22a feat: 99% complete migration to new state structs to get away from God-Config struct; i.e. AppConfig, AppState, and RequestContext 2026-04-19 17:05:27 -06:00
Dark-Alex-17 02b7ed37f6 feat: Supported the injection of RAG sources into the prompt, not just via the .sources rag command in the REPL so models can directly reference the documents that supported their responses 2026-02-13 17:45:56 -07:00
Dark-Alex-17 dbf7329e87 refactor: Updated to the most recent Rust version with 2024 syntax 2025-11-07 15:50:55 -07:00
Dark-Alex-17 216a3d53cd Baseline project 2025-07-06 10:45:42 -06:00