Commit Graph
142 Commits
Author SHA1 Message Date
Dark-Alex-17 5711432ac4 feat(mcp): add per-server tool allowlist policy module and allowedTools config field 2026-08-27 13:37:46 -06:00
Dark-Alex-17 3d640b9efa fix: checkpoint sessions that crash for easy resuming 2026-08-27 12:49:07 -06:00
Dark-Alex-17 3762bbe09f feat: prefer ~/.config/coyote/mcp.json for the user-scope MCP config
The user-scope MCP config historically lived at
<config-dir>/functions/mcp.json, a leftover from when MCP support was
part of the llm-functions tooling. It now resolves through a single
choke point with these semantics:

- Preferred location: <config-dir>/mcp.json (created there on first run)
- Historical <config-dir>/functions/mcp.json still honored when the
  preferred file does not exist, so existing installs are unchanged
- If both exist, the preferred location wins

--info/.info now reports the resolved location as mcp_config_file, and
the --scope help text plus config.agent.example.yaml reference the new
default. This also removes the asymmetry with the workspace scope,
which already used .coyote/mcp.json directly.
2026-08-26 15:34:20 -06:00
Dark-Alex-17 429ae3cc8e refactor(function): finish supervisor-to-agent vocabulary migration
The supervisor registry went kind-generic (TaskHandle::Agent | Job)
earlier in this branch, but the module holding the agent__* handlers
and two model-facing error strings still carried the old name:

- src/function/supervisor.rs -> src/function/agents.rs (it contains
  only agent__* tool handlers, pairing with function/jobs.rs; the
  kind-generic src/supervisor/ registry keeps its name)
- 'Supervisor tool failed' -> 'Agent tool failed'
- 'Unknown supervisor action' -> 'Unknown agent action'
2026-08-26 14:57:36 -06:00
Dark-Alex-17 404a45a311 feat(jobs): node-local job ownership and capability-gated job__* visibility
Graph LLM nodes now own the jobs they start, on every exit path. A new
node_job_scope on RequestContext records job ids started while a node
runs: the turn-end guardrail nags only about the node's own jobs
(parallel branches no longer see each other's), and the node executor
reaps — cancels and deregisters — anything left registered when the
node exits, including error, timeout, and retry-exhaustion paths.
Cross-node job handoff is no longer possible; a crashed node takes its
in-flight jobs with it.

With inheritance gone, job__* declarations are gated on capability:
the family is only declared when at least one declared tool would pass
job__start's whitelist (shared predicate: is_backgroundable_tool). One
carve-out — while a context still owns registered jobs (job started,
tool disabled mid-session), the lifecycle verbs stay declared so a
running job can never become unreachable; job__start alone disappears.
A graph node with tools: [] now sees no job__* tools at all.

Prompt instructions, tool declarations, and graph.example.yaml updated
to the node-local semantics; +7 tests, 8 visibility pins rewritten.
2026-08-26 13:43:05 -06:00
Dark-Alex-17 c376737bbd refactor(function): rename agent-tool symbols out of supervisor vocabulary
Since the supervisor registry became kind-generic (agents AND jobs),
'supervisor' naming on the agent__* tool plumbing was misleading:
job__* handlers operate on the same supervisor. Rename
SUPERVISOR_FUNCTION_PREFIX -> AGENT_FUNCTION_PREFIX,
supervisor_function_declarations -> agent_function_declarations,
handle_supervisor_tool -> handle_agent_tool. No behavior change.
2026-08-26 12:53:17 -06:00
Dark-Alex-17 4e50b4ff4a refactor: Modified the naming of several generalized supervisor values 2026-08-26 12:43:51 -06:00
Dark-Alex-17 28018f33c9 test(jobs): add feature, hardening, and surface test matrix for background jobs
Covers the plan's T7 matrix: zero-diff invariants when jobs are off
(byte-identical tool lists and prompts, None-vs-Some select_functions),
validation hardening (shell/path-shaped/PATH-resolvable names, undeclared
MCP servers, non-whitelisted and context-filtered tools, mapping-tool
aliases, mid-batch tool-scope freshness), process lifecycle (grandchild
process-group kill, pgid clear after normal completion, panic skips the
completion notification), guardrail behavior (finished-job discard on
force-terminate, bounded inject-then-terminate iteration burn), surface
conformance (concrete_tool_names exclusion, toggle rejection, tools_info
listing, infra preservation under empty filters), supervisor swaps
(use_agent/exit_agent kill running jobs, child contexts cannot reach
parent job ids), and graph-node job lifecycle with deferred notification
drain.
2026-08-25 20:33:10 -06:00
Dark-Alex-17 2d874f1d7c feat(jobs): push background-job completion notifications via per-context queue
- add NotificationQueue/SystemNotification: every context owns a fresh
  queue (children never inherit the parent's, avoiding first-drainer-wins
  races between transcripts)
- job tasks push job_completed/job_failed events on completion, failure,
  and timeout; a panic skips the push and is surfaced by the guardrail's
  finished-handle enumeration and collect's JoinError mapping instead
- events for jobs already collected or cancelled are dropped at drain time
  by filtering against live supervisor registration
- replace inject_escalation_notification with single-pass
  merge_system_channel: pending_escalations (root-only) ordered before
  system_notifications (any depth) on the last tool result of a batch;
  byte-identical output when notifications are empty, proven by the
  unmodified pre-merger characterization tests
2026-08-25 17:50:28 -06:00
Dark-Alex-17 177d61cf94 fix: harden job runner lifecycle and whitelist conformance
Reject fast built-in file tools (fs_* / ast_grep) in job__start per the
backgroundable-tools whitelist; clean up env-snapshot temp files on every
exit of run_process_job via a drop guard; bound the output-pump awaits and
abort them on the failure path; treat signal death (no exit code) as a
failure with a teaching message; bound job__collect's post-drain join with
a SIGKILL escalation so a TERM-ignoring process cannot hang collect after
a Ctrl-C teardown; document the unguarded SIGTERM pid-reuse window; give
the injected Background Jobs prompt section a fresh line on both sides;
extract the MCP server name with strip_prefix instead of replace.

Capacity-0 audit for jobs-disabled contexts: REPL displays have no
supervisor consumers (only Ctrl-C/exit cancel_recursive at
repl/mod.rs:460,473, kind-agnostic); session save/load does not persist
supervisor state (src/config/session.rs has no supervisor references) --
nothing to test for either.
2026-08-25 17:36:17 -06:00
Dark-Alex-17 cb025b7fff feat: add background job runner, job__* handlers, and start gates
Detached tokio::process runner with a frozen JobEnvSnapshot (env-derived
bin dirs, vault-interpolated agent envs, COYOTE_TOOL_TIMEOUT resolved at
start), process_group(0) with pgid-guarded SIGTERM/SIGKILL escalation,
capture-only ring-buffer telemetry, and LLM_OUTPUT read after wait().
MCP jobs snapshot a single-entry McpRuntime holding only the validated
server and render through the same free fn as the foreground path.

job__start enforces its gates synchronously before any spawn:
jobs_enabled, the backgroundable whitelist with directionality teaching
errors, the per-request declared-names stash captured in
before_chat_completion, then capacity (lazy supervisor get-or-init in
plain sessions). job__check/list read the shared JobState cell without
consuming; job__collect blocks with the escalation early-out and applies
a tail-biased char-boundary cap plus optional tail_lines; job__cancel
kills the group with a 5s grace.

Job declarations are injected iff jobs are enabled at agent init, the
plain-session function-init sites, and the exit_agent rebuild; job__ is
carved out of enabled_tools filtering and excluded from
concrete_tool_names so REPL toggles cannot grant or revoke it.
2026-08-25 17:36:17 -06:00
Dark-Alex-17 7f3f95d89d feat: generalize supervisor registry to TaskHandle enum with job scaffolding, kill discipline, and max_concurrent_jobs config
Implements T1 of plans/background-jobs-design.md (§6, R7/R8/R9):

- Supervisor.handles is now HashMap<String, TaskHandle> where
  TaskHandle = Agent(AgentHandle) | Job(JobHandle); agent-facing
  accessors (active_count, effective_active_count, is_finished, take,
  inbox, abort_signal_for, list_agents) match only Agent variants,
  preserving all existing external behavior byte-for-byte.
- New JobHandle/JobState/JobStatus/JobResult types with pgid-guarded
  process-group kill discipline: Drop and cancel_all/cancel_recursive
  kill the group only while state.pgid is still set (pid-reuse guard),
  via libc::killpg on unix and JoinHandle::abort elsewhere.
- Per-kind job capacity: Supervisor carries max_concurrent_jobs
  (builder-set, default 0); job registration rejects at capacity.
- Cross-kind teaching errors at the four agent-lookup miss sites
  (agent__check/collect/cancel/send_message) when the id is a
  registered job or job_-prefixed; genuinely-unknown ids keep their
  existing messages.
- Supervisor init condition is now can_spawn_agents || jobs_enabled in
  use_agent and both child-agent spawn paths, with agent capacity 0 in
  jobs-only contexts; use_agent cancels the old supervisor recursively
  before replacing it.
- max_concurrent_jobs config plumbing: global Config field, AgentConfig
  override + accessor, all four AppConfig touch points including the
  COYOTE_MAX_CONCURRENT_JOBS env override; shared
  effective_max_concurrent_jobs/jobs_enabled predicates
  (agent override -> global -> default 5; 0 disables).
- Stage dependency-free RingBuf (64 KiB default) in src/function/jobs.rs
  for the upcoming job output pump.
- New sanctioned dependency: libc 0.2 under cfg(unix).
2026-08-25 15:17:57 -06:00
Dark-Alex-17 3c9f443bce feat(cli)!: rename --prompt to --temp-role
Completes the .prompt/.temp-role split: --prompt set an ad-hoc system
role, which is what .temp-role now means everywhere. The --prompt name
is left unbound so a future one-shot MCP prompt flag can take it with
properly designed non-interactive semantics. use_prompt follows the
rename as use_temp_role.

BREAKING CHANGE: invocations using --prompt <text> must switch to
--temp-role <text>; clap rejects the old flag loudly.
2026-08-25 12:04:45 -06:00
Dark-Alex-17 a5a3eed6d8 fix(repl): offer prompts in .list tab completion and rename its listing helpers
MCP prompts are live, server-owned catalog entries, not managed assets;
list_prompt_assets/prompt_asset_rows implied otherwise and are now
list_mcp_prompts/mcp_prompt_rows. The .list completer was also missing
the prompts kind that the usage string and unknown-kind error advertise.
2026-08-25 11:37:41 -06:00
Dark-Alex-17 5177d95ee0 feat: complete --filter and --force on the first .install argument
The unified install parser accepts flags in any position, so the
first-argument completion list now offers all four flags instead of
only --git-host and --help.
2026-08-25 11:37:41 -06:00
Dark-Alex-17 61a3cfb662 feat(repl): add .prompt command with live staged tab-completion
Implements plans/mcp-resources-prompts-design.md §5.1/§5.4 (T6):

- .prompt <server> <name> [key=value ...] fetches an MCP prompt and
  submits the result as chat input via Input::from_str + ask(), never
  through REPL line parsing; GetPromptResult messages are flattened
  into one user-role block with unconditional [user]/[assistant] labels
- missing required prompt arguments are collected interactively
- .list prompts renders server/name/description/args via the unified
  catalog (CatalogItem gains an arguments field), degrading per server
- staged live tab-completion: enabled+running+prompts-capable servers
  (no RPC), then live prompt names, then key= argument suggestions with
  (required) markers; 2s timeout per RPC, all errors degrade to silent
  empty suggestions, ctx read guard dropped before blocking
- the enabled-server alias expansion is factored into a shared helper
  used by both tool-scope rebuild and completion
- BREAKING: the former .prompt <text> temp-role builtin is renamed to
  .temp-role <text> (behavior preserved); .prompt now belongs to MCP
  prompts, and a user macro named prompt or temp-role is shadowed
2026-08-25 11:37:41 -06:00
Dark-Alex-17 437512fd6d feat(mcp): gate meta-function emission on advertised server capabilities
Per-server McpServerFeatures (tools fail-open, resources/prompts
fail-closed) now drive which meta-functions are declared, with
gated_meta_function_prefixes as the single gating seam; read/prompt
declarations land together with their handlers. The server-enablement
sentinel keys on the always-emitted search name so resources-only
servers survive role filtering.

Implements plans/mcp-resources-prompts-design.md §4.4/D7 (T5).
2026-08-25 11:37:41 -06:00
Dark-Alex-17 01ada1da18 refactor(mcp): centralize meta-function prefix predicates and fix list_tools pagination
Implements T1 of plans/mcp-resources-prompts-design.md (§4.1, §4.6):

- Replace list_tools(None) with cursor-following list_all_tools() at the
  three call sites (start_server catalog build, catalog_items, describe)
  so paginating servers no longer silently lose tools past page one.
- Add MCP_READ/MCP_PROMPT prefix constants (declared nowhere yet; wired
  in T4/T7) plus centralized helpers MCP_META_FUNCTION_PREFIXES,
  is_mcp_meta_function, and mcp_meta_function_names.
- Mechanically replace every hand-rolled 3-prefix starts_with triple
  (partition in eval_tool_calls, 3 exclusion triples in
  select_enabled_functions, 3 inclusion triples + per-server name
  construction in select_enabled_mcp_servers) with the helpers,
  preserving the existing lax starts_with matching semantics and the
  mcp_invoke_* enablement sentinel (sentinel moves to search in T5).
- Behavior-neutral: dispatch chains keep their 3 arms, emission stays
  at exactly 3 meta-functions per server, existing tests unmodified.
- Add unit tests: helper classification, prefix-soundness property,
  lax-matching pin, ordered candidate-name construction.
2026-08-25 11:37:41 -06:00
Dark-Alex-17 e7307da6a9 feat: support name=value macro arguments with variable tab completion
Macro invocations (.name and .macro name) accept leading name=value
assignments before positional args: assignments set declared variables
directly so earlier variables can keep their defaults, remaining
positionals fill unassigned variables in declaration order, and the
free text after -- is never scanned for assignments. Identifier-shaped
keys that match no declared variable error with the declared list to
catch typos; non-identifier tokens containing = stay positional.
MacroVariable gains an optional description field, and tab completion
after a macro name offers name= candidates showing each variable's
description and default until the assignment prefix ends.
2026-08-24 14:20:21 -06:00
Dark-Alex-17 b6721d6a15 feat: add --help guides to the .install and .uninstall REPL commands
.install --help and .uninstall --help print a usage guide covering the
owner/repo shorthand, --git-host, --filter, --force, ref pinning, and
the bundle lifecycle; both usage error lines now point at --help. Tab
completion offers --help for both commands and --git-host on the first
.install argument, and the unified install parser accepts flags in any
argument position so completed flags work wherever they are inserted.
The empty .list bundles message now shows the REPL install form
alongside the CLI one.
2026-08-24 13:58:09 -06:00
Dark-Alex-17 30c1637dff refactor: Refactored some bundle const locations 2026-08-24 11:15:13 -06:00
Dark-Alex-17 6b5535956d fix: harden the bundle lifecycle per code review
The path-escape guard that uninstall applies to recorded paths now also
covers update's obsolete-file deletion through a shared check, so a
tampered store cannot turn either delete site into an arbitrary file
removal. Updates gain a working non-interactive path: --yes now applies
to --update-bundle (locally modified files, obsolete files, and modified
mcp entries are all kept; everything else refreshes), owned mcp entries
whose recorded hash still matches the local entry take the remote side
without prompting, and the non-TTY conflict bails name the flag that
actually works per surface. An update records its new commit and version
only after files and mcp entries land, so an aborted update cannot claim
content it never wrote. The store gains a version field and rejects
stores from newer builds, the corrupt-store error no longer advises the
removal that would forfeit ownership tracking, and duplicate records
tracking one source abort a rename instead of overwriting a record.
Reinstalling from a source URL reclassifies owned unmodified files as
silent refreshes just like updates. git runs with GIT_TERMINAL_PROMPT=0
and a null stdin so private or mistyped URLs fail instead of hanging.
File comparison fills buffers fully before comparing, deleting an
obsolete file prunes emptied directories, mcp.json backfill uses the
fsynced atomic writer, --list-bundles no longer triggers builtin
backfill, bundle-name completion logs store errors instead of swallowing
them and offers --yes, and REPL .uninstall rejects unknown flags.
2026-08-24 11:15:13 -06:00
Dark-Alex-17 80b082423c fix: address code review findings on the bundle lifecycle
The user-origin marker on replaced mcp.json entries is now sticky:
re-records and cross-bundle transfers only upgrade replaced to
transferred when the prior record proves bundle origin, so updating a
bundle can no longer make uninstall delete a key the user had before the
bundle replaced it. Canonical source URLs lowercase only the host, since
self-hosted forges treat repository paths as case-sensitive and
collapsing distinct repos misdirects updates and uninstalls. git clone
invocations pass '--' before the URL so a crafted source cannot be
parsed as a git flag. Lifecycle flags (--install, --install-builtins,
--update-bundle, --uninstall) and their companions now conflict
explicitly instead of first-match dispatch silently dropping actions.
--install-from returns as a hidden tombstone that errors with the
replacement instead of feeding the flag to the LLM as prompt text.
--list-bundles dispatches before config load so a pure read no longer
boots MCP servers. write_file_atomic fsyncs before the rename so a crash
cannot persist a truncated store. REPL: .uninstall accepts --yes,
.install rejects trailing tokens after a category, and .install remote
gets a migration hint. Plus polish: host validation rejects '#' and '?',
renamed_to no longer serializes null, derived names get a debug assert
against the validator, completions share DEFAULT_GIT_HOST, README
mentions skills.
2026-08-24 11:15:13 -06:00
Dark-Alex-17 53ccbda97c feat: expand owner/repo shorthand for --install with a --git-host flag
--install someuser/repo expands to https://github.com/someuser/repo;
--git-host overrides the default host and forces source interpretation
even when the value matches an installed bundle name. Two or more path
segments are accepted so nested GitLab-style groups work, and #ref
pinning applies to shorthand values. --uninstall resolves owner/repo
against recorded sources: a single match uninstalls, multiple matches
prompt an interactive selection showing each bundle's source, and
non-interactive runs bail instead of guessing.
2026-08-24 11:15:13 -06:00
Dark-Alex-17 4987d850f9 feat!: remove the deprecated --install-from flag and .install remote form
--install <git-url|name> is the single entry point for remote installs
and updates; the unified .install dispatch likewise replaces
.install remote. Flag completion for .install now applies to the
unified form.
2026-08-24 11:15:13 -06:00
Dark-Alex-17 bca85a4017 feat: rename install flags and unify .install dispatch
--install now takes a git URL or an installed bundle name: categories
are redirected to the new --install-builtins, installed names become
implicit updates, and source-shaped values install remotely. The old
--install-from keeps its exact behavior as a hidden deprecated alias.
The REPL's .install gains the same unified dispatch while keeping
.install <category> and .install remote <url> back-compat.
2026-08-24 11:15:12 -06:00
Dark-Alex-17 0e5d85f2ff feat: add --uninstall and .uninstall for installed bundles 2026-08-24 11:15:12 -06:00
Dark-Alex-17 2790a823b0 feat: add --list-bundles and .list bundles with drift detection 2026-08-24 11:15:12 -06:00
Dark-Alex-17 e1b5562888 refactor: render .list agents and .list skills as comfy-tables
Long agent/skill descriptions wrapped badly in the bullet-list format.
Extract a shared asset_table helper (UTF8_FULL + dynamic arrangement,
same style as the markdown renderer and .list macros) and use it for
the agents, skills, and macros listings. The skills loaded marker
keeps its color; comfy-table's custom_styling feature accounts for
ANSI sequences in column widths.
2026-08-21 11:55:14 -06:00
Dark-Alex-17 fba040c668 fix: render .list macros as a comfy-table instead of fixed-width columns
Hand-rolled {:<24} padding broke alignment as soon as a macro name
exceeded the column width. Reuse the comfy-table UTF8_FULL preset with
dynamic content arrangement, matching the markdown renderer's tables.
2026-08-21 11:55:13 -06:00
Dark-Alex-17 f61a8f7afd style: updated styles across macro implementation 2026-08-21 11:55:13 -06:00
Dark-Alex-17 4323d4823c feat: add --no-workspace-macros opt-out for workspace macro loading
Mirrors --no-workspace-mcp exactly: a CLI-only flag backed by an
AppConfig field (default false) that disables .coyote/macros in both
the resolved macro policy and Macro::load's workspace-then-global
preference, so the two always agree (custom-commands design §5).
2026-08-21 11:55:13 -06:00
Dark-Alex-17 5478c5a239 feat: execute non-isolated macros on the live REPL context
Make the macro isolated field live (design §3, §9 step 5):
isolated: false now runs the interpolated steps via run_repl_command
on the live RequestContext — session-recorded, conversation-visible,
with mutating steps persisting by design — while isolated: true keeps
the forked execution byte-for-byte unchanged.

- Add macro_non_isolated companion field beside macro_flag; both
  fork-propagation sites mirror it verbatim.
- RAII MacroModeGuard wraps the whole &mut RequestContext (DerefMut
  passthrough) and restores flag+mode on every exit path, including a
  failing step; steps remain fail-fast.
- Reject nested macro invocation when the current mode is non-isolated
  ("nested macros not allowed in non-isolated mode"); an isolated
  macro's step may still run a non-isolated macro inline on its fork.
- use_agent now suppresses the agent's default session only for
  isolated macros; a non-isolated .agent step engages it as if typed.
2026-08-21 11:55:13 -06:00
Dark-Alex-17 e94bd450cd feat: surface macros as first-class custom commands in the REPL
Implements the invocation and management surfaces from
plans/custom-commands-design.md §4 and §6:

- Top-level dispatch: an enabled macro <name> now runs as ".<name> [args]"
  from the command catch-all; runtime-disabled macros point at
  ".macro enable <name>", locked macros name the owning config, and
  unknown commands keep the existing error verbatim
- .macro enable|disable <name>: runtime toggles over the in-memory
  global-level enabled_macros list (disable with no list materializes
  all-active-minus-name); toggles error when a role/agent/session
  allowlist owns the field
- .set enabled_macros <csv|null> with workspace-then-global existence
  validation; .set key completion gains enabled_macros and the
  previously missing enabled_skills
- Dynamic completion: enabled macros (with descriptions) join built-ins
  on ".<TAB>" without touching the static command registry;
  ".macro <TAB>" lists invocable macros (incl. built-in-shadowed ones)
  plus the enable/disable subcommands; second-arg completion offers
  toggle-eligible names
- .list macros: enriched table (name, source, isolated, state,
  description) covering every resolver state incl. missing and
  shadowed rows; .help gains a custom-commands section
- Session info/render and sysinfo display enabled_macros; Macro::load
  resolves workspace-then-global; enable/disable rejected as macro
  names in the creator
2026-08-21 11:55:13 -06:00
Dark-Alex-17 d791098e51 feat: reason-specific warnings for MCP servers that fail OAuth at startup
Distinguish why an OAuth MCP server was not started: never authenticated
(no stored credentials), stored token expired and refresh failed, or the
server rejected a token that looked valid. McpTokenStatus replaces the
Option<String> return of load_or_refresh_mcp_token, and McpAuthRequired
carries the reason across the error boundary via anyhow context.
2026-08-14 11:07:56 -06:00
Dark-Alex-17 68135b97d1 feat: append new built-in rag__query function to RAG contexts to allow further querying by LLMs
CI / All (ubuntu-latest) (push) Failing after 29s
CI / All (macos-latest) (push) Has been cancelled
CI / All (windows-latest) (push) Has been cancelled
2026-08-12 16:25:50 -06:00
Dark-Alex-17 ecda258d3a style: Cleaned up some minor styling issues 2026-08-11 13:04:27 -06:00
Dark-Alex-17 7a732436aa feat(rag): add attach-only Qdrant provider, attach wizard and sandbox wiring
Adds QdrantProvider as a read-only driver for pre-existing remote Qdrant
collections, an interactive '.rag attach' wizard, and the sandbox credential
and domain-whitelisting wiring that lets an attached RAG work inside a sandbox.

Attach-only by design: rebuild_indexes bails for both the attached and the
unattached case rather than silently succeeding. Coyote never writes to Qdrant
in this change.

Vectors are never hydrated back from Qdrant. Cosine collections L2-normalize
stored vectors on write, so reading them back returns unit-length copies of the
originals; the YAML vector copy is authoritative and the serialization guard
stays scoped to the duckdb driver alone.

Collections keyed by string or UUID point IDs are rejected at attach time. The
read path parses point ids as u64 inside a filter_map, so such a collection
would otherwise yield zero results with no error.

The three response-shape parsers are pure functions over an already-parsed JSON
body, unit-tested against captured fixtures, with the async wrappers delegating
to them rather than duplicating the logic.

'.rag' now splits its first argument, so '.rag attach <name>' no longer tries to
load a RAG literally named 'attach <name>'.
2026-08-10 13:40:22 -06:00
Dark-Alex-17 98d3ba4a83 feat(rag): add DuckDB provider behind the RAG driver abstraction
Phase 3 of the RAG driver abstraction. Adds a `DuckDbProvider` that keeps
vectors and document content in a `.duckdb` sidecar next to the existing
YAML metadata, selected by the `driver: duckdb` field.

- `src/rag/providers/duckdb.rs` (new): vector search via the vss extension
  and keyword search via fts, an all-or-nothing hydration path (a partial
  read is an error, never a shorter map), and an anti-wipe guard that
  refuses the destructive `CREATE OR REPLACE TABLE` when `data.vectors` is
  empty while `data.files` is not and the store still holds rows.
- `src/rag/mod.rs`: `sync_documents` now refreshes `bm25`/`node_to_docs`
  BEFORE the fallible `provider.rebuild_indexes`. `self.data` is already
  mutated by that point, so propagating a provider error afterwards would
  leave the derived in-memory state describing the previous corpus while
  `data` describes the new one. Both rebuilds are pure functions of
  `self.data` and cannot fail, so running them first is always safe.
- `src/config/paths.rs`: sidecar path helpers.
- `src/rag/providers/mod.rs`, `src/config/agent.rs`: driver dispatch and
  RAG cache keying.

Also keeps `RequestContext::rag_key` in lockstep with `rag` at the two
sites that were still missing it, so that a cache insert and its matching
invalidate are structurally incapable of disagreeing:

- `use_agent` assigned `self.rag` from the agent but never set `rag_key`.
  This one was live. Agent RAGs are inserted under `RagKey::Agent(<name>)`,
  so with `rag_key == None` the invalidation guards in `rebuild_rag` and
  `edit_rag_docs` matched nothing and `.rebuild rag` left the stale cache
  entry in place. Worse, a preceding `.rag <name>` left a stale
  `Named(<name>)` key attached to the agent's RAG, pointing the
  invalidation at an unrelated RAG's cache entry. Now mirrors the insert
  key exactly, yielding `None` when the agent has no RAG.
- `exit_agent` cleared `self.rag` but left `rag_key` behind. Latent rather
  than live, since `rebuild_rag`/`edit_rag_docs` both bail on
  `rag.is_none()` before reaching the invalidate guards, but the guards
  that make it unobservable are not the kind of thing to depend on.

Covered by `use_agent_does_not_carry_stale_rag_key`, and by a new
assertion in `exit_agent_clears_all_agent_state`.
2026-08-10 12:51:56 -06:00
Dark-Alex-17 a968c3228d feat(rag): add driver/attached fields, validation floors and force-reingest
Phase 1 of the RAG driver abstraction (design doc sections 5.1-5.5a).

Data model:
- Add `driver: String` (serde default "yaml" via RagData::default_driver) and
  `attached: bool` as the first two fields of RagData, so driver metadata sits
  at the top of each RAG YAML. Old files without them load unchanged.
- Add `#[serde(default)]` to the non-Option fields so a minimal attached-RAG
  YAML deserializes, and add `skip_serializing_if` to `vectors` so an empty
  map renders no `vectors:` key.
- Add a hand-written `impl Default for RagData` delegating to `RagData::new()`.
  It is deliberately not derived: a derived impl yields `driver: ""`, which is
  not a valid driver string.

Validation (the price of the new serde defaults):
- Add `RagData::validate()`, called from `Rag::load()` after deserialization.
  It enforces the (driver, attached) matrix and, critically, numeric floors
  that the new defaults would otherwise mask: `top_k >= 1` unconditionally
  (a 0 makes every query return nothing, silently), and `chunk_size >= 1` plus
  `chunk_overlap < chunk_size` when not attached (a 0 chunk_size is a real
  divide-by-zero panic while sizing embedding batches).
- Reject `.set rag_top_k 0` at the setter, before the set/update fork. Without
  this, the new load-time floor turns one keystroke into an unloadable RAG:
  the setter saves immediately and no dot-command can reach the file again.

Rebuild actually re-embeds now:
- `.rebuild rag` and `--rebuild-rag` previously re-scanned paths and re-embedded
  nothing, because the content-hash skip fired regardless of the refresh flag.
  Extract that decision into a module-level `find_hash_skip()` free function and
  thread a `force_reingest` flag through `sync_documents()` and
  `refresh_document_paths()`, set true only from `rebuild_rag()`. `.edit rag-docs`
  stays incremental. Re-embedding costs time and API spend, so `rebuild_rag()`
  now prints a one-line file-count warning first (no prompt: the path is
  reachable from a non-interactive CLI flag).

Attached-RAG guards:
- Block `.rebuild rag` / `--rebuild-rag` and `.edit rag-docs` on attached RAGs,
  which Coyote did not index and whose source documents it does not own.
- Add `Rag::driver()`, `Rag::is_attached()` and `Rag::file_count()`, and surface
  driver/attached through `Rag::export()` so `.info rag` shows them.

Adds 12 unit tests (1299 -> 1311), including the two gate tests pinning that a
forced re-ingest does not hash-skip while an ordinary refresh still does.
2026-08-10 11:04:51 -06:00
Dark-Alex-17 9540345ec7 feat: Added loaded indicators to .list tools/mcp-servers/skills
CI / All (ubuntu-latest) (push) Failing after 27s
CI / All (macos-latest) (push) Has been cancelled
CI / All (windows-latest) (push) Has been cancelled
2026-08-05 13:11:24 -06:00
Dark-Alex-17 70b6d51b55 test: Implemented unit tests to prevent regression on agent reasoning effort inheritance
CI / All (ubuntu-latest) (push) Failing after 25s
CI / All (macos-latest) (push) Has been cancelled
CI / All (windows-latest) (push) Has been cancelled
2026-08-04 13:12:37 -06:00
Dark-Alex-17 9e5e8a60f2 fix: agents inherit global reasoning effort if unset 2026-08-04 13:09:13 -06:00
Dark-Alex-17 e6dc24beb5 feat: add a new .recover command for sessions to recover from errors
CI / All (ubuntu-latest) (push) Failing after 24s
CI / All (macos-latest) (push) Has been cancelled
CI / All (windows-latest) (push) Has been cancelled
2026-08-04 12:02:31 -06:00
Dark-Alex-17 d79ea55e09 fix: include graph-agent descriptions in .agent <TAB> completions
CI / All (ubuntu-latest) (push) Failing after 25s
CI / All (macos-latest) (push) Has been cancelled
CI / All (windows-latest) (push) Has been cancelled
2026-07-27 09:34:36 -06:00
Dark-Alex-17 a2c4f05c8c feat: renamed the user__ask to user__select and improved descriptions to improve model usage 2026-07-23 18:22:18 -06:00
Dark-Alex-17 63f73f22c3 style: applied formatting to new long run features
CI / All (ubuntu-latest) (push) Failing after 25s
CI / All (macos-latest) (push) Has been cancelled
CI / All (windows-latest) (push) Has been cancelled
2026-07-23 12:30:30 -06:00
Dark-Alex-17 54c5079cb7 feat: long-running session improvements
- Hang fix: 120s timeout on compression LLM call + raw_stream
  channel-close handling (None => break instead of spinning)
- Supervisor effective active count: stop counting finished
  JoinHandles as occupying capacity slots
- Universal tool result size cap: truncate_if_needed() on
  ToolResult, applied in eval_tool_calls() after escalation block;
  configurable via max_tool_result_chars in AppConfig/AgentConfig
- Windowed compression: compression_keep_last config param keeps
  the N most recent messages visible after compression
- Fix pre-existing flaky test: add #[serial] to
  handle_list_available_unrestricted_when_no_whitelist so it does
  not race with TestConfigDirGuard-based tests that temporarily
  populate the agents data dir
2026-07-23 12:25:54 -06:00
Dark-Alex-17 ab0b89dd67 fix: fetch descriptions from graph agent configs as well when listing agents 2026-07-22 12:59:30 -06:00
Dark-Alex-17 ed7ad36475 feat: Created the raw_markdown configuration flag 2026-07-22 11:03:27 -06:00