274 Commits
Author SHA1 Message Date
Dark-Alex-17 f2d90ed7a6 docs(TASK-021): fix task-queue example IDs + document dispatch/collect/failure semantics
- prompts.rs DEFAULT_SPAWN_INSTRUCTIONS: example IDs task_1/task_2 -> "1"/"2"
  (real numeric-string IDs; old format silently produced dep_error + unblocked
  task), plus task-queue rules: root tasks with agent are never auto-dispatched,
  task_complete is what dispatches dependents, auto-dispatched agents must be
  collected, failed tasks permanently block dependents.
- architect config: optional task-queue mirroring guidance for parallel mode
  (disk task files stay the durable store; queue is in-memory).
- sisyphus config: short note on encoding dependency-shaped bursts as
  agent__task_create chains; todos remain the tracking source of truth.
2026-09-14 10:50:33 -06:00
Dark-Alex-17 22976a79f9 fix(TASK-020): surface step-runner LLM-fault captures where the fallback lands
The three fallback-capture keys (orient_failure, sweep_failure,
handoff_failure) were write-only dead state: captured on LLM-node failure
but interpolated nowhere, so end_failure rendered an empty STEP_FAILED
shell and write_handoff carried no trace a dead sweep.

- new crash-proof script node note_llm_fault distills orient/handoff
  'LLM node...' failure text into fault_note (prefix-anchored; empty when
  neither key holds a fault); orient and write_handoff fallbacks now route
  through it before end_failure
- end_failure renders 'Pipeline fault (if any): {{fault_note}}' (sentinel
  and all existing fields preserved; fault_note defaulted in initial_state)
- write_handoff prompt interpolates {{sweep_failure}} with a
  PIPELINE-FAULT VISIBILITY instruction mirroring the review_report
  treatment (fault -> Deviations entry + step_summary; success/empty
  ignored)
- tests: note_llm_fault fault/clean/crash/truncation paths via the
  GRAPH_STATE harness; wiring test pins the retargeted fallbacks,
  note_llm_fault routing, {{fault_note}} in end_failure, and the
  sweep-fault prompt/instruction anchors; warning baseline unchanged
2026-09-14 10:50:33 -06:00
Dark-Alex-17 4263d684e9 feat(TASK-020): finding-verifier + step-runner fail-closed hardening
finding-verifier: parse gains max_attempts 2 + parse_failure capture +
fallback to a new parse_fault marker that rewrites verdicts to a single
UNVERIFIABLE PIPELINE-FAULT entry and continues to done (sentinel
preserved — the caller's verify lane degrades instead of dying);
verify_one gains a branch-local verify_fault marker normalizing the
engine failure text into a schema-conformant UNVERIFIABLE verdict.

step-runner: implement gains fallback end_failure (no retry — reruns
against a mutated tree are unsafe; STEP_FAILED renders the failure via
coder_result); independent_review gains fallback write_handoff with the
handoff instructions and route_review treating an "Agent node failed:"
review_report as review-did-not-run (fail-visible, guard ahead of the
🔴 grep); orient/edge_case_sweep/write_handoff capture their failure
text via state_updates, shrinking the bundled fallback-capture warning
baseline back to zero.

R5 tests: fault-marker normalization + crash paths (raw non-JSON
GRAPH_STATE), route_review.sh fault/critical/clean routing via bash+jq,
and structural wiring tests pinning fallbacks, sentinels, and
end_failure's initial_state-backed template keys.
2026-09-14 10:50:33 -06:00
Dark-Alex-17 a8496aa50e fix(TASK-019): carry PIPELINE-FAULT prefix through verdict.py's crash guard
render.py's empty-diff stub bypass is anchored on the 'PIPELINE-FAULT:'
prefix in reason/attention, but verdict.py's crash guard emitted
'verdict computation error: …' / 'verdict script error: …' without it —
on an empty diff a crashed verdict gate collapsed into the
'No changes to review.' stub and the fail-closed NEEDS-HUMAN verdict
never reached the final report.

- prefix the crash-guard reason and attention entry with PIPELINE-FAULT:
- strengthen the existing crash test to assert the prefix on both fields
- add R5 chained test: empty diff + crash-inducing state piped
  verdict.py -> render.py must render the fault, never the stub
- add crash-guard symmetry tests for parse_fault.py / aux_fault.py
  (raw non-JSON GRAPH_STATE keeps the fault marker) and a test that a
  fault survives the attention[:5] cap alongside 6 user flags
2026-09-14 10:50:33 -06:00
Dark-Alex-17 4e72c6f5e6 feat(TASK-019): code-reviewer fail-closed review pipeline
Every llm/agent stage that can die persistently now falls back to a
machine-readable PIPELINE-FAULT sentinel instead of killing the graph:

- review_domain -> branch-local domain_fault marker (banner-prefixed
  domain_report the map collects; completeness_gate precedent)
- verify -> verdict (verifier fault renders findings unverified + a
  PIPELINE-FAULT attention line)
- parse -> parse_fault -> render (complete NEEDS-HUMAN verdict_out;
  render's no-changes stub is bypassed for fault verdicts)
- refine_groups -> cover_gate (deterministic-proposal fallback absorbs
  the failure; degradation noted in groups_note)
- aux_lanes -> aux_fault -> synthesize (aux_note fault marker; visible,
  never blocking - aux is enrichment)
- synthesize -> verdict (synth_failure marker; keyed off the failure
  prefix + non-empty diff, never findings==[], so clean zero-finding
  reviews stay MERGE-READY)

verdict.py gains unified fault accounting (R2): any PIPELINE-FAULT in
domain_reports / verifier_output / state fault keys forces NEEDS-HUMAN,
prefix-anchored so a report merely quoting the marker mid-text never
trips it; old 'PIPELINE FAULT' spelling migrated. Faults are prepended
to attention so the [:5] cap can never hide one. Dedicated *_failure
state keys capture engine failure text on every fallback+output_schema
node, keeping the bundled warning baseline at zero.

15 python3-guarded R5 tests: fault paths, quoted-marker precedence,
happy-path byte-compat regression, marker normalization, crash-path
fail-closed (verdict/cover_gate/domain_fault), verifier-fault-on-empty-
diff render, and the no-changes stub regression.
2026-09-14 10:50:33 -06:00
Dark-Alex-17 ebb9e9af62 fix(TASK-018): harden verdict_gate fault routing and widen default_lanes fallback
Adversary finding 1: verdict_gate treated any lane report CONTAINING
'PIPELINE-FAULT:' as a lane fault, so a real review quoting the marker
silently bypassed red-finding counting and sentinel parsing. Lane-fault
detection is now precise — only a report that IS the lane_fault.py
marker (starts with it) routes to the fault rule. Adds the missing
regression tests: reds block despite MERGE-READY, NEEDS-HUMAN without
reds passes with attention, probe INCONCLUSIVE blocks with the
environment note, a gate crash fails closed, and a quoting report is
routed to the red rule, not the fault rule.

Adversary finding 2: default_lanes overwrote caller-forced lanes and
dropped the security lane the deterministic signals guaranteed. The
fallback now unions its defaults with caller-forced lanes (canonicalized
via the same aliases build_items uses) and forces security on
auth/deps/exec signals or hardened posture — selection degrades wider,
never narrower, and stays deterministic via a fixed lane order. Tests
cover forced-lane survival, alias canonicalization, unknown-name
tolerance, each security signal, and determinism.
2026-09-14 10:50:33 -06:00
Dark-Alex-17 8407729d5a feat(TASK-018): review-gauntlet lane degradation + verification passthrough
- lane_fault.py + fallback on all four run_* lane nodes: an agent-node
  failure is normalized into a PIPELINE-FAULT lane result instead of
  killing the graph
- verdict_gate.py: PIPELINE-FAULT lane results block distinctly from
  SKIPPED and missing-sentinel; a PIPELINE-FAULT in signals_error blocks
  at the gauntlet level
- build_items.py: restructured into main() + fail-closed guard (crash
  emits empty lanes + PIPELINE-FAULT) and folds lanes_degraded into
  lanes_summary
- parse: state_updates/fallback -> parse_fault.py, which records the
  fault in signals_error and jumps to the verdict gate
- select_lanes: state_updates/fallback -> default_lanes.py, a
  deterministic wider-never-narrower lane fallback
- verification_commands threaded through parse into run_adversary's
  prompt (declared-only, never invented)
- run_probe prompt gains the aborted-attempt reconcile line
- 8 gauntlet_* R5 tests in src/config/request_context.rs (script harness
  + graph interpolation)
2026-09-14 10:50:33 -06:00
Dark-Alex-17 1e46743420 fix(TASK-017): bound run_checks runtime and fail-close its node-level death
Adversary conformance-review fixes for the TASK-017 exec-evidence stage:

- run_checks.py: total-runtime deadline (3300s = node timeout minus margin);
  each command gets min(900s, remaining budget), commands past the deadline
  are recorded as {cmd, skipped: deadline} entries so in-script handling
  stays authoritative instead of the node timeout killing the script from
  outside. POSIX hardening: per-command process group (start_new_session)
  + killpg on timeout so hung grandchildren cannot linger; non-POSIX
  limitation documented in the docstring.
- graph.yaml: run_checks gains fallback: pipeline_fault; check_criterion
  treats SKIPPED records as at-best PARTIAL (unproven, never failed).
- pipeline_fault.py: run_checks-stage attribution grounded in real engine
  behavior (script-node fallback writes nothing into state, executor.rs
  script arm) — nonempty diff_text proves facts completed, so the fault is
  the verification runner; emits 'PIPELINE-FAULT: verification runner
  killed'. Empty diff_text still attributes to diff resolution.
- verdict.py: renders skipped records as [SKIPPED] instead of a bogus
  [FAIL] exit-? line; non-degraded verdict semantics untouched.
- tests: outer-except ENVIRONMENT degradation, deadline timeout+skip (env
  seam ADVERSARY_RUN_CHECKS_DEADLINE_SECS), pipeline_fault stage
  attribution (parse / facts / run_checks), check_criterion prompt cites
  {{exec_results}}, verdict SKIPPED rendering; run_adversary_script_env
  helper for env-carrying invocations.
- cargo fmt violations in 3d7dea9 test code fixed (fmt --check exit 0).
2026-09-14 10:50:33 -06:00
Dark-Alex-17 d50059a56f feat(TASK-017): adversary execution evidence + fail-closed routing
- parse extracts caller-declared verification_commands (schema + initial_state);
  never invents commands. parse gains fallback + state_updates capturing the
  failure string (TASK-016 fallback-capture warning stays silent).
- new run_checks script node (facts -> run_checks -> map_criteria, timeout
  3600): runs each declared command in the project dir (900s per-command
  timeout), records exec_results {cmd, exit, duration_s, tail~50}; 'none
  declared' / ENVIRONMENT markers instead of guessing or failing the node.
- check_criterion judges execution criteria against {{exec_results}} only:
  recorded green run = MET citing it, recorded failure = UNMET, markers =
  PARTIAL with an ENVIRONMENT note.
- fail-closed routing (R1/R2): parse/facts fallback -> pipeline_fault marker
  script -> verdict; holistic fallback -> verdict with holistic_failure
  captured. verdict.py: any PIPELINE-FAULT forces DIVERGES with the fault as
  complaint #1, per-criterion results still reported; report gains a
  'Verification runs:' section. Non-degraded semantics unchanged.
- R5 rust tests (python3-guarded, local cmd_available): verdict fault path,
  holistic-failure fault, CONFORMS regression, run_checks markers + recorded
  runs, crit_gate contract regression.
2026-09-14 10:50:33 -06:00
Dark-Alex-17 75cc2a4b9c feat(TASK-010): add max_attempts to read-only agent lanes in bundled graphs 2026-09-14 10:50:33 -06:00
Dark-Alex-17 3254fe9f3c feat: Fixed graph agents with new agent variable passing functionality 2026-09-12 01:37:20 -06:00
Dark-Alex-17 99e592565a feat: Significant code review suite rewrite with improved graph agent features 2026-09-11 15:33:21 -06:00
Dark-Alex-17 e744da8870 feat: update the web_search_coyote tool to attempt to use the current model first then fallback to the configured model for web searches 2026-09-11 13:47:44 -06:00
Dark-Alex-17 3e91813cff feat: removed temperature specification in deep-research and finding-verifier agents to make them more univerally usable 2026-09-11 11:22:06 -06:00
Dark-Alex-17 b4c01e0f28 chore(agents): drop the inert output reducers from librarian and finding-verifier 2026-09-11 10:56:28 -06:00
Dark-Alex-17 a7744e7f89 fix(agents): name the map-branch output key in deep-research and finding-verifier
An llm node never persists its completion under `output` (the binding
is transient), so a map branch without state_updates collected the
stale inherited value: deep-research produced `None` findings and
finding-verifier errored on its first item because `output` was absent.

Both maps now declare an explicit output_key and their branch nodes
write it via state_updates. graph.example.yaml's research_subject gets
the same named-key pattern and its branch comment describes it.

Design: plans/map-subgraph-branches-design.md §2.6, §3.7 (C9).
2026-09-11 10:56:26 -06:00
Dark-Alex-17 d71cf75209 fix: Fixed the bad formatting in the finding-verifier agent 2026-09-09 17:39:56 -06:00
Dark-Alex-17 ddce9e330e docs: Added whetstone to the architect and sisyphus READMEs 2026-09-09 17:39:42 -06:00
Dark-Alex-17 2928125b0e feat: created the finding-verifier and whetstone agents for continuous code quality improvements 2026-09-09 17:22:26 -06:00
Dark-Alex-17 13ebe04472 feat: support setting the tool_timeout in the main config file instead of only via an environment variable 2026-09-08 17:22:21 -06:00
Dark-Alex-17 6104a48e56 Merge branch 'main' of github.com:Dark-Alex-17/coyote 2026-09-08 11:25:38 -06:00
Dark-Alex-17 a5984eca80 fix: exclude null bytes from fs_grep output on binaries 2026-09-08 11:24:59 -06:00
github-actions[bot] d6dc6c96d6 chore: bump Cargo.toml and sandbox image to 0.10.2 2026-09-04 04:15:00 +00:00
Dark-Alex-17 f1cb6589bc feat: refresh the model catalog from live API data at runtime 2026-09-03 11:17:58 -06:00
Dark-Alex-17 af7d37890c fix: children subagents couldn't properly send messages to parent inboxes 2026-09-02 14:18:16 -06:00
Dark-Alex-17 141289d973 feat: Improved the architect, explore, and sisyphus agents to have a team mode so they can all work in parallel as a team and updated the parallel-research skill to make explicit mention of this functionality 2026-09-02 13:53:12 -06:00
github-actions[bot] 7b37eb4602 chore: bump Cargo.toml and sandbox image to 0.10.1
CI / All (ubuntu-latest) (push) Failing after 29s
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2026-08-31 20:08:42 +00:00
Dark-Alex-17 016f2654e4 fix: make binary shims for custom tools cross-device compatible so users can't accidentally break sandboxes via sbx cp ~/.config/coyote <sbx-name>:/home/agent/.config 2026-08-31 13:48:56 -06:00
github-actions[bot] c102da5665 chore: bump Cargo.toml and sandbox image to 0.10.0
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2026-08-29 05:49:07 +00:00
Dark-Alex-17 baa45970da feat: upgraded to v2 mixin schema
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2026-08-28 18:24:58 -06:00
Dark-Alex-17 176a81412a feat: improved first-time run experience and included a templated configuration file that now has comments like the config.example.yaml so users don't have to go to the repo to see all the knobs
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2026-08-28 15:15:10 -06:00
Dark-Alex-17 d3914955e2 feat(TASK-005): carry the quality bar through sisyphus and architect
sisyphus: Quality bar line in the code-reviewer spawn prompt (omitted when
the task prompt carried none); rigor-aware WARNING handling with
(deferred by quality bar) FOLLOW-UPS tagging; evidence-cited rejection
protocol for [convention] findings (repo convention at file:line or a
recorded plan decision; never for CRITICAL/[correctness]; escalate on
re-raise); rigor-to-posture default map for security-reviewer spawns.

architect: Phase B quality-bar round + other:<label> librarian lane;
Phase E Sisyphus CONTEXT and adversary prompts carry rigor/surfaces and
the plan's Quality bar excerpt; task-close logs rejected-finding lines;
Phase F PR body gains the Quality bar line and Review decisions section;
two new anti-patterns (bare rejections, rigor suppressing CRITICAL).
2026-08-28 14:47:57 -06:00
Dark-Alex-17 a8d730cf01 feat(TASK-004): reviewer routing — code-reviewer quality-bar resolution, domain linter pass, surface-skill routing, rigor folding; file-reviewer surface-skill whitelist + convention/correctness marker 2026-08-28 14:47:57 -06:00
Dark-Alex-17 cf638305e6 feat(TASK-003): add surface skills batch B — worker-review, iac-review, migration-review, cicd-review 2026-08-28 14:47:57 -06:00
Dark-Alex-17 3601faa969 feat(TASK-002): add surface skills batch A — rest-api-review, cli-review, library-review
Three new read-only review skills under assets/skills/, mirroring the
transactional-integrity canon: frontmatter load triggers, read-only
enabled_tools, production-bar severity checklists with
[convention]/[correctness] markers, marker-semantics and
orchestrator-linter paragraphs, and aspect-boundary lists.
rest-api-review includes gRPC and GraphQL sections.
2026-08-28 14:47:57 -06:00
Dark-Alex-17 e4c5f42a25 feat(TASK-001): add rigor/surfaces declaration layer to planning skills
design-session: Quality bar round in Step 2 (rigor/surfaces proposal,
per-surface confirm/drop, other:<label> lane, autonomous fallback),
rigor+surfaces frontmatter and Quality bar section in the Step 3 PLAN
template, poc-dodge anti-pattern.
task-tracking: optional per-task surfaces key (inherits the plan's list);
rigor stays run-level only.
plan-gatekeeping: manifest category 11 (Quality bar) with
FRICTION/BLOCKING severity guidance.
2026-08-28 14:47:57 -06:00
Dark-Alex-17 290f6b257f docs: refined the description of coyote better 2026-08-27 15:55:13 -06:00
Dark-Alex-17 af697d129b docs: updated the coyote description to be more accurate to its true use and purpose 2026-08-27 15:34:38 -06:00
Dark-Alex-17 93e90106a8 feat: create a new probe agent to probe code verifications using usage-pattern testing 2026-08-27 13:59:28 -06:00
Dark-Alex-17 35e4c82f27 feat: Add in the web_search_coyote tool where helpful 2026-08-27 13:59:09 -06:00
Dark-Alex-17 ebe7816600 feat: claude and openai native web search via web_search_coyote
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2026-08-26 15:22:24 -06:00
Dark-Alex-17 304b8f635f fix(tools): interactive-shell semantics and stderr capture in execute_command
Two long-standing agent-facing defects:

1. bash -e aborted the model's script at the first intermediate
   non-zero status (grep with no matches exits 1, inspecting a failing
   test run, a probing subshell), so trailing guards like '; exit 0'
   never executed and output was partially or entirely lost. Dropped
   -e: the last statement now decides the exit code, matching the
   interactive-shell semantics models expect. pipefail is kept so a
   failing pipeline stage still surfaces in the exit code.

2. Only stdout was redirected into $LLM_OUTPUT, and the harness
   returns just $LLM_OUTPUT on success, so commands whose useful
   output goes to stderr (git push, cargo progress, curl -v) returned
   empty on success. Added 2>&1.
2026-08-26 14:15:34 -06:00
Dark-Alex-17 6256b5fcfa docs: document background jobs across prompts, config example, and README
- Extend the injected Background Jobs prompt guidance: system_notifications
  push on completion, collect-only-when-idle wait protocol, and the graph
  LLM-node collect-before-final-turn rule
- Mention the system_notifications push in the agent spawning guidance and
  in the sisyphus/architect wait-protocol text (agent completions push
  notifications too)
- config.example.yaml: max_concurrent_jobs (default 5, 0 = disabled)
- README: features-list entry pointing at the Background-Jobs wiki page
2026-08-25 18:24:44 -06:00
Dark-Alex-17andSisyphus c7384b7a9b feat: run an advisory observability pass after implementation in sisyphus
Ultraworked with [Sisyphus](https://github.com/code-yeongyu/oh-my-openagent)

Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>
2026-08-25 13:19:10 -06:00
Dark-Alex-17andSisyphus ed9778c07b feat: add an observability-review skill for post-implementation monitoring analysis
Ultraworked with [Sisyphus](https://github.com/code-yeongyu/oh-my-openagent)

Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>
2026-08-25 13:19:09 -06:00
Dark-Alex-17andSisyphus 5a32219178 feat: check under- and over-logging in the code review gate
Ultraworked with [Sisyphus](https://github.com/code-yeongyu/oh-my-openagent)

Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>
2026-08-25 13:19:09 -06:00
Dark-Alex-17andSisyphus 9e652f7801 feat: calibrate logging registers in the code-writing agents
Ultraworked with [Sisyphus](https://github.com/code-yeongyu/oh-my-openagent)

Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>
2026-08-25 13:19:09 -06:00
Dark-Alex-17andSisyphus fcff426ae5 feat: add a logging-discipline skill for calibrating log output to repo conventions
Ultraworked with [Sisyphus](https://github.com/code-yeongyu/oh-my-openagent)

Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>
2026-08-25 13:17:33 -06:00
Dark-Alex-17 cb0802c2d0 fix: fix grep "binary" errors when searching UTF-8 files with unicode characters like some of the Coyote source 2026-08-25 13:06:16 -06:00
Dark-Alex-17andSisyphus f8cab9b439 feat: run design interviews as grilling frontier rounds across the planning agents
Ultraworked with [Sisyphus](https://github.com/code-yeongyu/oh-my-openagent)

Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>
2026-08-24 15:12:37 -06:00