docs: Updated README and created graph.example.yaml spec
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# Graph-based agent definition (full-featured reference)
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# Location: <loki-config-dir>/agents/<agent-name>/graph.yaml
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#
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# A graph agent is defined by THIS FILE ALONE. An agent directory contains
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# EITHER a config.yaml (a normal LLM-loop agent) OR a graph.yaml (a graph
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# agent) -- never both. The presence of graph.yaml is what makes the agent
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# a graph agent.
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#
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# This file is a REFERENCE: it documents every available field. It is not a
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# runnable agent as-is -- the `agent:`, `script:`, and `documents:` values
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# point at things that would need to exist for a real agent.
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#
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# Full documentation:
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# https://github.com/Dark-Alex-17/loki/wiki/Graph-Agents
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# ---------------------------------------------------------------------------
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# Identity
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# ---------------------------------------------------------------------------
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name: example-graph-agent # Agent name (should match the directory name)
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description: | # Free-form prose describing the workflow
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A reference workflow: triage a request, retrieve context, branch on a
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script decision, run either a sub-agent or an LLM step, then gate the
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result behind human approval.
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version: "1.0" # Graph SCHEMA version. Only "1.0" is accepted.
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# ---------------------------------------------------------------------------
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# Agent-level config (all optional)
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# The same knobs a normal agent's config.yaml carries. In a graph agent they
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# live here instead of in a config.yaml.
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# ---------------------------------------------------------------------------
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model: anthropic:claude-sonnet-4-6 # Default model for `llm` nodes that don't override it
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temperature: 0.0 # Default sampling temperature for `llm` nodes
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top_p: null # Default sampling top-p for `llm` nodes
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global_tools: # Tool universe an `llm` node's `tools:` whitelist draws from
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- web_search_loki.sh
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- fetch_url_via_curl.sh
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mcp_servers: # MCP servers an `llm` node may reference via `mcp:<server>`
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- pubmed-search
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conversation_starters: # Suggested prompts surfaced in the UI
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- "Research LOINC code 2160-0"
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# NOTE: `can_spawn_agents` is NOT a field here. It is DERIVED: a graph can
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# spawn child agents iff it contains at least one `agent` node (this graph
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# does -- see `deep_dive`).
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# ---------------------------------------------------------------------------
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# Execution settings (all optional)
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# ---------------------------------------------------------------------------
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settings:
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max_loop_iterations: 100 # PER-NODE visit cap. If one node id is entered more
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# than this many times, execution aborts. Default 100.
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timeout: 600 # Optional wall-clock cap (seconds) on the whole run,
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# checked between node transitions.
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log_state_snapshots: true # Log state before each node (debug/trace). Default true.
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validate_before_run: true # Run the graph validator at startup. Default true.
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# ---------------------------------------------------------------------------
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# Seed state (optional)
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# Values placed into graph state before any node runs; reference anywhere via
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# {{key}}. NOTE: `initial_prompt` is seeded automatically by Loki with the
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# caller's prompt -- do not set it here.
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# ---------------------------------------------------------------------------
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initial_state:
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audience: "clinician"
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# Seed an empty default for any key that a STRICT field (a node prompt /
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# instructions / question / End output) references but that is only set on
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# SOME paths. `refinement` is set only if the `refine` input node runs;
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# seeding it "" keeps `finalize`'s strict prompt from failing on the
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# approve-directly path.
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refinement: ""
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# ---------------------------------------------------------------------------
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# Entry point
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# ---------------------------------------------------------------------------
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start: triage # ID of the first node to run (must exist in `nodes`)
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# ---------------------------------------------------------------------------
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# Nodes
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# Each node is keyed by its id. The `id:` inside a node must match its key
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# (it may also be omitted -- Loki fills it in from the key).
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#
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# Node types: agent | script | approval | input | llm | rag | end
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# ---------------------------------------------------------------------------
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nodes:
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# --- llm node -----------------------------------------------------------
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# A one-shot LLM call (with an optional bounded tool-call loop). Runs in a
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# fresh isolated context. Tools are STRICTLY opt-in (see `tools`).
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triage:
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id: triage
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type: llm
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description: Classify the request and extract its topic.
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instructions: | # Optional system prompt (templated against state)
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You triage research requests for a {{audience}} audience.
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prompt: | # REQUIRED user prompt (templated against state)
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Classify this request and extract the key topic:
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{{initial_prompt}}
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tools: [] # Tool whitelist. Omitted or [] = NO tools at all.
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# A list narrows to EXACTLY those entries.
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output_schema: # Optional JSON Schema. The output is parsed to JSON
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type: object # and its top-level object keys auto-merge into state
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properties: # (so `topic` / `needs_research` become {{topic}} etc).
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topic: { type: string }
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needs_research: { type: boolean }
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required: [topic, needs_research]
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state_updates: # {{output}} = this node's result (here, the parsed object)
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triage_result: "{{output}}"
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next: retrieve # REQUIRED for llm nodes: the success route
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# --- rag node -----------------------------------------------------------
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# Hybrid (vector + keyword) retrieval against a per-node knowledge base.
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# The knowledge base is built ONCE, at agent load time, into
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# <agent-dir>/retrieve.yaml (named after this node's id).
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retrieve:
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id: retrieve
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type: rag
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documents: # REQUIRED. Files, directories, URLs, loader paths.
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- ./knowledge/ # relative paths resolve against the agent directory
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- https://example.com/reference
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query: "{{topic}}" # Retrieval query (templated). Default: {{initial_prompt}}.
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top_k: 5 # Chunks to retrieve. Default = the KB's own top_k.
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timeout: 120 # Retrieval timeout in seconds. Default 120.
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# Knowledge-base BUILD config (optional; used only when the KB is first
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# built). When embedding_model + chunk_size + chunk_overlap are ALL set,
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# the KB builds with no interactive prompts (works in non-interactive runs).
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embedding_model: openai:text-embedding-3-small
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chunk_size: 1000
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chunk_overlap: 100
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reranker_model: null # Optional reranker for hybrid-search results
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batch_size: 100 # Optional embedding-request batch size
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state_updates: # {{output}} = { context: <str>, sources: [<path>, ...] }
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context: "{{output.context}}"
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sources: "{{output.sources}}"
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next: decide
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# --- script node --------------------------------------------------------
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# Runs a .sh / .py / .ts script. The script receives state via the
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# GRAPH_STATE env var (inline JSON) OR GRAPH_STATE_FILE (path to a JSON
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# file, used when state exceeds 32 KiB) -- exactly one is set. It must print
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# a single JSON OBJECT on stdout: keys merge into state, and the reserved
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# `_next` key (if present) overrides routing.
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decide:
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id: decide
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type: script
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script: scripts/decide.py # Path relative to the agent directory
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timeout: 30 # Seconds. Default 30.
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state_updates: # Applied after the stdout JSON is merged
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decided_for: "{{topic}}"
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next: summarize # Default route if the script emits no `_next`
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fallback: summarize # Route taken if the script FAILS (crash / bad JSON)
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# This script is expected to emit `_next: deep_dive` (or no `_next`, in
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# which case `next` is used). Because `deep_dive` is reached only via the
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# script's dynamic `_next`, the startup validator will report it as an
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# "unreachable" WARNING -- that is expected for `_next`-routed targets.
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# --- agent node ---------------------------------------------------------
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# Spawns a full Loki sub-agent and waits for it. The child uses ITS OWN
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# tool stack -- agent nodes have NO `tools:` field. No schema hint is
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# injected even when `output_schema` is set (unlike llm nodes).
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deep_dive:
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id: deep_dive
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type: agent
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agent: deep-researcher # Name of an existing Loki agent to spawn
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prompt: | # User message sent to the child (templated)
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Research {{topic}} in depth. Existing context:
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{{context}}
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timeout: 600 # Optional wall-clock cap, seconds. Default 300.
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output_schema: # Optional -- same extraction as llm nodes
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type: object
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properties:
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summary: { type: string }
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findings:
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type: array
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items: { type: string }
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required: [summary, findings]
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state_updates:
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research: "{{output}}"
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next: review # REQUIRED for agent nodes
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# --- llm node with a narrowed tool whitelist ----------------------------
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summarize:
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id: summarize
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type: llm
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instructions: "You write concise summaries for a {{audience}} audience."
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prompt: "Summarize the topic {{topic}}, using your tools as needed."
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tools: # Narrow whitelist: EXACTLY these entries, nothing else
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- web_search_loki.sh # an exact global-tool / custom-tool name
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- mcp:pubmed-search # `mcp:<server>` includes that server's functions
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model: anthropic:claude-haiku-4-5 # Optional per-node model override
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temperature: 0.3 # Optional per-node sampling override
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max_attempts: 2 # Retry count on TRANSIENT errors only. Default 1.
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max_iterations: 10 # Tool-call-loop turn cap. Default 10.
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fallback: review # Route here if all attempts fail
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timeout: 300 # Optional node wall-clock cap, seconds (unset = no timeout)
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state_updates:
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research: "{{output}}"
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next: review # REQUIRED for llm nodes: the success route
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# --- approval node ------------------------------------------------------
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# Human-in-the-loop checkpoint. `user__ask` ALWAYS offers a free-form
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# "type your own answer" option, so `on_other` is REQUIRED.
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review:
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id: review
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type: approval
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question: |
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Proposed result for {{topic}}:
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{{research}}
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Approve?
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options: # The listed choices shown to the user
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- "yes"
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- "no"
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routes: # Map each listed option to its next node
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"yes": finalize
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"no": rejected_end
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on_other: refine # REQUIRED: route for ANY answer not in `routes`
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state_updates:
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decision: "{{choice}}" # {{choice}} = the chosen option OR the free-form text
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timeout: 300 # Optional: seconds to wait for a response
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on_timeout: rejected_end # Optional: route taken on interaction timeout
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# --- input node ---------------------------------------------------------
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# Collects a free-form string from the user.
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refine:
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id: refine
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type: input
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question: "What should be changed about the result?"
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default: "minor wording only" # Optional: used if the user submits empty input.
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# NOTE: a substituted default is NOT re-validated,
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# so make sure it would satisfy `validation`.
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validation: "len(input) > 0" # Optional length predicate: len(input) <op> N,
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# <op> in > >= < <= == . Length only -- no regex.
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state_updates:
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refinement: "{{input}}" # {{input}} = the user's text
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timeout: 120 # Optional
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on_timeout: rejected_end # Optional: route taken on interaction timeout
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next: finalize # REQUIRED for input nodes: the success route
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# --- llm node (final synthesis) -----------------------------------------
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finalize:
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id: finalize
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type: llm
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prompt: |
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Produce the final answer for {{topic}}.
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Result so far: {{research}}
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Requested refinement (if any): {{refinement}}
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state_updates:
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final_answer: "{{output}}"
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next: done
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# --- end nodes ----------------------------------------------------------
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# Terminate the graph. `output` (templated, lenient interpolation) becomes
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# the graph's final result. A graph needs at least one `end` node.
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done:
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id: done
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type: end
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state_updates: # Optional: applied BEFORE `output` is rendered
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status: "completed"
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output: |
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[{{status}}] {{final_answer}}
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Sources: {{sources}}
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rejected_end:
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id: rejected_end
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type: end
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output: "Request for {{topic}} was not approved."
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